RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 POU2AF1Q16633 256 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 Q8TCH9 128 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 LINC00322Q6ZN03 302 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-201ENST00000380152 DNAJC30Q96LL9 226 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 J3QQQ9 107 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 USMG5Q96IX5 58 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 GHRHP01286 108 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 CFAP161Q6P656 301 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 BOD1L2Q8IYS8 172 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 TP53TG3Q9ULZ0 132 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 ATMQ13315 3056 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 COX6B1P14854 86 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 RUSC1-AS1Q66K80 236 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 NTN5Q8WTR8 489 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-201ENST00000380152 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 BAALCQ8WXS3 180 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 C22orf46C9J442 243 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 CRIP3Q6Q6R5 217 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 ZNF503Q96F45 646 aa3.29□□□□□ -1.88
BRCA2-201ENST00000380152 ODF1Q14990 250 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 TAL2Q16559 108 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 C15orf53Q8NAA6 179 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 C20orf78Q9BR46 151 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 TRAV12-1A0A0B4J245 112 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 TEN1Q86WV5 123 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 LOXP28300 417 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-201ENST00000380152 PATE2Q6UY27 113 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 F6UB75 175 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 CFHR3Q02985 330 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 PIP4P2Q8N4L2 257 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 PRSS33Q8NF86 280 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 Q6ZS92 163 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 MSRB2Q9Y3D2 182 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 MGAQ8IWI9 3026 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 KALRNO60229 2985 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GAGE12JA6NER3 117 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GAGE7O76087 117 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GAGE12FP0CL80 117 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GAGE12GP0CL81 117 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GAGE12IP0CL82 117 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 RPL39P62891 51 aaKnown RBP3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GAGE4Q13068 117 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 LINC00311Q8N616 119 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GP9P14770 177 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 HTN3P15516 51 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 CTRLP40313 264 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 UBE2E1P51965 193 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 GDF5OSQ5U4N7 250 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 SMIM20Q8N5G0 67 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 ZNRF2Q8NHG8 242 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 CTSZQ9UBR2 303 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 A4D1N5 150 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 OOSP1A8MZH6 123 aa3.28□□□□□ -1.88
BRCA2-201ENST00000380152 DMXL2Q8TDJ6 3036 aa3.28□□□□□ -1.89
BRCA2-201ENST00000380152 PRR30Q53SZ7 412 aaPredicted RBP3.28□□□□□ -1.89
BRCA2-201ENST00000380152 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-201ENST00000380152 XCL2Q9UBD3 114 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 RBX1P62877 108 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 IGLL5B9A064 214 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 I3L2K1 104 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 CFC1BP0CG36 223 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 CFC1P0CG37 223 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 DEFB131AP59861 70 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 FAM236AA0A1B0GUQ0 79 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 FAM236BA0A1B0GV22 79 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 SOCS3O14543 225 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 MRPL36Q9P0J6 103 aaKnown RBP3.27□□□□□ -1.89
BRCA2-201ENST00000380152 TINCRA0A1B0GVN0 87 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 TRACP01848 142 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 INAFM2P0DMQ5 153 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 RASL10AQ92737 203 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 AGPAT4-IT1Q9H0P7 198 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 NDUFA12Q9UI09 145 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 RPL35AP18077 110 aaKnown RBP3.27□□□□□ -1.89
BRCA2-201ENST00000380152 COL12A1Q99715 3063 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 MUSTN1Q8IVN3 82 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 KAAG1Q9UBP8 84 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-201ENST00000380152 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-201ENST00000380152 RBAKDNA6NC62 111 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 BRWD1-AS2P59051 145 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 CR1LQ2VPA4 569 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 RNF138Q8WVD3 245 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 OVOL2Q9BRP0 275 aa3.27□□□□□ -1.89
BRCA2-201ENST00000380152 K7EIM0 57 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 BUB3O43684 328 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 MAPK1IP1LQ8NDC0 245 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 PTH2Q96A98 100 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 PCSK5Q92824 1860 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 PROP1O75360 226 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 DKK4Q9UBT3 224 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 E9PLD3 99 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 DAND5Q8N907 189 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 UTF1Q5T230 341 aa3.26□□□□□ -1.89
BRCA2-201ENST00000380152 LOXL1Q08397 574 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms