RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SVEP1Q4LDE5 3571 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 TRBV7-3A0A075B6L6 115 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 IGHG2P01859 326 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 C2orf66Q6UXQ4 117 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 ZNF479Q96JC4 524 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
PHF1-201ENST00000374512 C10orf105Q8TEF2 133 aa13.55□□□□□ -0.24
PHF1-201ENST00000374512 NDUFS8O00217 210 aa13.55□□□□□ -0.24
PHF1-201ENST00000374512 IGHV4OR15-8A0A075B7B6 117 aa13.54□□□□□ -0.24
PHF1-201ENST00000374512 A0A087WW49 117 aa13.54□□□□□ -0.24
PHF1-201ENST00000374512 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
PHF1-201ENST00000374512 RNASE4P34096 147 aaKnown RBP13.54□□□□□ -0.24
PHF1-201ENST00000374512 BAALCQ8WXS3 180 aa13.54□□□□□ -0.24
PHF1-201ENST00000374512 RNF223E7ERA6 249 aa13.54□□□□□ -0.24
PHF1-201ENST00000374512 J3KRW8 73 aa13.54□□□□□ -0.24
PHF1-201ENST00000374512 RPL39LQ96EH5 51 aaKnown RBP13.54□□□□□ -0.24
PHF1-201ENST00000374512 RNASE3P12724 160 aaKnown RBP13.53□□□□□ -0.24
PHF1-201ENST00000374512 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
PHF1-201ENST00000374512 SELENOKQ9Y6D0 94 aa13.53□□□□□ -0.24
PHF1-201ENST00000374512 MGPP08493 103 aa13.52□□□□□ -0.24
PHF1-201ENST00000374512 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.24
PHF1-201ENST00000374512 RIPPLY3P57055 190 aa13.52□□□□□ -0.24
PHF1-201ENST00000374512 CLEC2AQ6UVW9 174 aa13.52□□□□□ -0.24
PHF1-201ENST00000374512 KLK15Q9H2R5 256 aa13.52□□□□□ -0.24
PHF1-201ENST00000374512 RPL11P62913 178 aaKnown RBP13.52□□□□□ -0.25
PHF1-201ENST00000374512 RPL24P83731 157 aaKnown RBP13.52□□□□□ -0.25
PHF1-201ENST00000374512 LY6EQ16553 131 aa13.52□□□□□ -0.25
PHF1-201ENST00000374512 RRN3P1Q2M238 152 aa13.52□□□□□ -0.25
PHF1-201ENST00000374512 PRSS29PA6NIE9 313 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 RHPN1-AS1Q9BWJ2 59 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 DAZ1Q9NQZ3 744 aaKnown RBP13.51□□□□□ -0.25
PHF1-201ENST00000374512 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
PHF1-201ENST00000374512 A6NDX4 124 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 KLLNB2CW77 178 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 H3BUX3 64 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 J3QR89 54 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 CYSLTR1Q9Y271 337 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 KIF25-AS1Q9Y6Z4 181 aa13.51□□□□□ -0.25
PHF1-201ENST00000374512 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
PHF1-201ENST00000374512 A6NJY4 79 aa13.5□□□□□ -0.25
PHF1-201ENST00000374512 K7EMT4 169 aa13.5□□□□□ -0.25
PHF1-201ENST00000374512 GNRH2O43555 120 aa13.5□□□□□ -0.25
PHF1-201ENST00000374512 TEX48A0A1B0GUV7 120 aa13.49□□□□□ -0.25
PHF1-201ENST00000374512 LGALS1P09382 135 aaKnown RBP13.49□□□□□ -0.25
PHF1-201ENST00000374512 ID1P41134 155 aa13.49□□□□□ -0.25
PHF1-201ENST00000374512 ATP5J2P56134 94 aa13.49□□□□□ -0.25
PHF1-201ENST00000374512 PRADC1Q9BSG0 188 aa13.49□□□□□ -0.25
PHF1-201ENST00000374512 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
PHF1-201ENST00000374512 AGRNO00468 2067 aa13.49□□□□□ -0.25
PHF1-201ENST00000374512 HOXA3O43365 443 aaPredicted RBP13.48□□□□□ -0.25
PHF1-201ENST00000374512 PF4V1P10720 104 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 LINC00315P59091 139 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 SCGB2A2Q13296 93 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 TMEM141Q96I45 108 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 IGHV4-30-2A0A087WSY4 118 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 FAM159AQ6UWV7 190 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 ZNF580Q9UK33 172 aa13.48□□□□□ -0.25
PHF1-201ENST00000374512 VCYO14598 125 aa13.47□□□□□ -0.25
PHF1-201ENST00000374512 IGHV3-11P01762 117 aa13.47□□□□□ -0.25
PHF1-201ENST00000374512 MSMBP08118 114 aa13.47□□□□□ -0.25
PHF1-201ENST00000374512 POLR2KP53803 58 aaKnown RBP13.47□□□□□ -0.25
PHF1-201ENST00000374512 SPANXB1Q9NS25 103 aaPredicted RBP13.47□□□□□ -0.25
PHF1-201ENST00000374512 F6UB75 175 aa13.47□□□□□ -0.25
PHF1-201ENST00000374512 COX6B1P14854 86 aa13.47□□□□□ -0.25
PHF1-201ENST00000374512 HERVK_113P61574 105 aa13.47□□□□□ -0.25
PHF1-201ENST00000374512 ZNF815PA8K554 130 aa13.46□□□□□ -0.25
PHF1-201ENST00000374512 DEFB1P60022 68 aa13.46□□□□□ -0.25
PHF1-201ENST00000374512 DOPEY1Q5JWR5 2465 aa13.46□□□□□ -0.26
PHF1-201ENST00000374512 IGIPA6NJ69 53 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 SPRY2O43597 315 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 GAGE13Q4V321 117 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 TIMM17AQ99595 171 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 KIR2DL4Q99706 377 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 H3BMG7 143 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 BLCAPP62952 87 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 PMVKQ15126 192 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 CFAP46Q8IYW2 2715 aa13.45□□□□□ -0.26
PHF1-201ENST00000374512 TRBV6-5A0A0K0K1A5 114 aa13.44□□□□□ -0.26
PHF1-201ENST00000374512 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
PHF1-201ENST00000374512 CRYGDP07320 174 aa13.44□□□□□ -0.26
PHF1-201ENST00000374512 WFDC2Q14508 124 aa13.44□□□□□ -0.26
PHF1-201ENST00000374512 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
PHF1-201ENST00000374512 CFHR3Q02985 330 aa13.44□□□□□ -0.26
PHF1-201ENST00000374512 SCGB1D4Q6XE38 83 aa13.44□□□□□ -0.26
PHF1-201ENST00000374512 TMEM238C9JI98 176 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 TP53TG1Q9Y2A0 90 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 ZFHX3Q15911 3703 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 IGSF10Q6WRI0 2623 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 SCGB1A1P11684 91 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 UBE2D1P51668 147 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 SUMO4Q6EEV6 95 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
PHF1-201ENST00000374512 DCANP1Q8TF63 244 aa13.43□□□□□ -0.26
PHF1-201ENST00000374512 IGLV4-69A0A075B6H9 119 aa13.42□□□□□ -0.26
PHF1-201ENST00000374512 TRBV27A0A0K0K1C4 114 aa13.42□□□□□ -0.26
PHF1-201ENST00000374512 LGALS9O00182 355 aa13.42□□□□□ -0.26
PHF1-201ENST00000374512 TSHBP01222 138 aa13.42□□□□□ -0.26
PHF1-201ENST00000374512 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
PHF1-201ENST00000374512 Q6ZS46 218 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms