RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 COL5A1-AS1Q5SY13 56 aa11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 SLC25A34Q6PIV7 304 aa11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 LGALS1P09382 135 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 RNASE3P12724 160 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-202ENST00000374253 MPV17L2Q567V2 206 aa11.96□□□□□ -0.49
CNKSR1-202ENST00000374253 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.49
CNKSR1-202ENST00000374253 JPT2Q9H910 190 aa11.96□□□□□ -0.49
CNKSR1-202ENST00000374253 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.5
CNKSR1-202ENST00000374253 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
CNKSR1-202ENST00000374253 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
CNKSR1-202ENST00000374253 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
CNKSR1-202ENST00000374253 FCER1GP30273 86 aa11.95□□□□□ -0.5
CNKSR1-202ENST00000374253 Q8N8P6 123 aa11.95□□□□□ -0.5
CNKSR1-202ENST00000374253 CD5LO43866 347 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 TMEM208Q9BTX3 173 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 NUDT3O95989 172 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 PRSS1P07477 247 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 CD7P09564 240 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 ERASQ7Z444 233 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 C11orf44Q8N8P7 122 aa11.94□□□□□ -0.5
CNKSR1-202ENST00000374253 KLLNB2CW77 178 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 ELANEP08246 267 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 LGALS9BQ3B8N2 356 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 LGALS9CQ6DKI2 356 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 FAM159AQ6UWV7 190 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 PDZD2O15018 2839 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 ADAMTSL5Q6ZMM2 481 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 NEGR1Q7Z3B1 354 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 UBE2E2Q96LR5 201 aa11.93□□□□□ -0.5
CNKSR1-202ENST00000374253 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 SNRPD3P62318 126 aaKnown RBP11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 TCTEX1D4Q5JR98 221 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 APRG1Q8IVJ8 170 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 RASL10AQ92737 203 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 FOXC2Q99958 501 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 A0A087WWL8 130 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 TMEM89A2RUT3 159 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 K7EQG2 157 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 ZNF124Q15973 351 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 MYOZ3Q8TDC0 251 aa11.92□□□□□ -0.5
CNKSR1-202ENST00000374253 A0A0J9YX75 114 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 NPSP0C0P6 89 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 DPH3P1Q9H4G8 78 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 NMUP48645 174 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 LAGE3Q14657 143 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
CNKSR1-202ENST00000374253 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 LINC01546A6NGU7 62 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 COX8AP10176 69 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 DPF1Q92782 380 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 HTN1P15515 57 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
CNKSR1-202ENST00000374253 C7orf71A4D174 169 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 ODF1Q14990 250 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 SMIM2Q9BVW6 85 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 C2orf91Q6ZV80 131 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 MRAP2Q96G30 205 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 UNC79Q9P2D8 2635 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 NOTCH2Q04721 2471 aa11.89□□□□□ -0.51
CNKSR1-202ENST00000374253 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
CNKSR1-202ENST00000374253 PRM2P04554 102 aa11.88□□□□□ -0.51
CNKSR1-202ENST00000374253 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
CNKSR1-202ENST00000374253 DLEU1O43261 78 aa11.88□□□□□ -0.51
CNKSR1-202ENST00000374253 LGALS9O00182 355 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 FGF6P10767 208 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 Q8N1Y9 231 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 JMJD1CQ15652 2540 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 TRBV7-9A0A0J9YWB2 115 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 A0A1W2PRX2 142 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 F5H697 171 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 TMEM160Q9NX00 188 aa11.87□□□□□ -0.51
CNKSR1-202ENST00000374253 IGKV2D-26A0A0A0MRZ7 120 aa11.86□□□□□ -0.51
CNKSR1-202ENST00000374253 ANK3Q12955 4377 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-202ENST00000374253 CDKN1BP46527 198 aa11.86□□□□□ -0.51
CNKSR1-202ENST00000374253 DEFB131AP59861 70 aa11.86□□□□□ -0.51
CNKSR1-202ENST00000374253 GTSCR1Q86UQ5 136 aa11.86□□□□□ -0.51
CNKSR1-202ENST00000374253 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-202ENST00000374253 RNF152Q8N8N0 203 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 LINC01619G3V211 115 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 LINC00315P59091 139 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 SAMD13Q5VXD3 122 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 Q6ZSV7 163 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
CNKSR1-202ENST00000374253 KIF25-AS1Q9Y6Z4 181 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms