RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 RHOHQ15669 191 aa18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 DEFB125Q8N687 156 aa18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 RPL18AQ02543 176 aaKnown RBP18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGLL5B9A064 214 aa18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 TANC1Q9C0D5 1861 aa18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 PKDREJQ9NTG1 2253 aa18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV4-30-2A0A087WSY4 118 aa18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 FRMD6-AS1P0C7T7 363 aa18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV4-28A0A0C4DH34 117 aa18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 RPL39P62891 51 aaKnown RBP18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 RBAKDNA6NC62 111 aa18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 MUSTN1Q8IVN3 82 aa18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 GTSF1Q8WW33 167 aa18.61■□□□□ 0.57
RAPGEF1-203ENST00000372195 CNOT1A5YKK6 2376 aaKnown RBP18.6■□□□□ 0.57
RAPGEF1-203ENST00000372195 SLX1AQ9BQ83 275 aa18.6■□□□□ 0.57
RAPGEF1-203ENST00000372195 EML6Q6ZMW3 1958 aa18.6■□□□□ 0.57
RAPGEF1-203ENST00000372195 KIF26AQ9ULI4 1882 aaPredicted RBP18.6■□□□□ 0.57
RAPGEF1-203ENST00000372195 TRAV4A0A0B4J268 109 aa18.6■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV3-30P01768 117 aa18.59■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV3-33P01772 117 aa18.59■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV3-30-3P0DP02 117 aa18.59■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV3-30-5P0DP03 117 aa18.59■□□□□ 0.57
RAPGEF1-203ENST00000372195 KRTAP27-1Q3LI81 207 aa18.59■□□□□ 0.57
RAPGEF1-203ENST00000372195 SLC25A29Q8N8R3 303 aa18.59■□□□□ 0.57
RAPGEF1-203ENST00000372195 Q8NFD4 153 aa18.58■□□□□ 0.57
RAPGEF1-203ENST00000372195 E7EUB6 86 aa18.58■□□□□ 0.57
RAPGEF1-203ENST00000372195 RBM3P98179 157 aaKnown RBP18.58■□□□□ 0.57
RAPGEF1-203ENST00000372195 NCKAP5O14513 1909 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 NPBQ8NG41 125 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 C8orf31Q8N9H6 132 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 UBE2BP63146 152 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 PLXNB3Q9ULL4 1909 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 ZFP2Q6ZN57 461 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 A0A0J9YXV3 536 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 H3BUA1 57 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 CTSGP08311 255 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 PIP4P1Q86T03 277 aa18.57■□□□□ 0.56
RAPGEF1-203ENST00000372195 GYPEP15421 78 aa18.56■□□□□ 0.56
RAPGEF1-203ENST00000372195 ORMDL1Q9P0S3 153 aa18.56■□□□□ 0.56
RAPGEF1-203ENST00000372195 IGKV3D-7A0A0C4DH55 119 aa18.56■□□□□ 0.56
RAPGEF1-203ENST00000372195 NBL1P41271 181 aa18.56■□□□□ 0.56
RAPGEF1-203ENST00000372195 IGLV11-55A0A075B6I3 123 aa18.56■□□□□ 0.56
RAPGEF1-203ENST00000372195 SRSF2Q01130 221 aaKnown RBP18.56■□□□□ 0.56
RAPGEF1-203ENST00000372195 FXYD2P54710 66 aa18.55■□□□□ 0.56
RAPGEF1-203ENST00000372195 IGKV1-17P01599 117 aa18.55■□□□□ 0.56
RAPGEF1-203ENST00000372195 RNASE8Q8TDE3 154 aaKnown RBP18.55■□□□□ 0.56
RAPGEF1-203ENST00000372195 BUB3O43684 328 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 K7EQD1 137 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 IGLV2-14P01704 120 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 IGHV4OR15-8A0A075B7B6 117 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 A0A087WW49 117 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 WFDC2Q14508 124 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 NCR3O14931 201 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 DKK4Q9UBT3 224 aa18.54■□□□□ 0.56
RAPGEF1-203ENST00000372195 DYSFO75923 2080 aa18.53■□□□□ 0.56
RAPGEF1-203ENST00000372195 ICOSQ9Y6W8 199 aa18.53■□□□□ 0.56
RAPGEF1-203ENST00000372195 NCOR1O75376 2440 aa18.53■□□□□ 0.56
RAPGEF1-203ENST00000372195 J3QKU1 62 aa18.52■□□□□ 0.56
RAPGEF1-203ENST00000372195 SPANXA1Q9NS26 97 aa18.52■□□□□ 0.56
RAPGEF1-203ENST00000372195 PRSS47A8MTI9 375 aa18.52■□□□□ 0.56
RAPGEF1-203ENST00000372195 DEFB4AO15263 64 aa18.52■□□□□ 0.56
RAPGEF1-203ENST00000372195 MRPL36Q9P0J6 103 aaKnown RBP18.52■□□□□ 0.56
RAPGEF1-203ENST00000372195 DOPEY2Q9Y3R5 2298 aa18.52■□□□□ 0.56
RAPGEF1-203ENST00000372195 A4D1N5 150 aa18.52■□□□□ 0.55
RAPGEF1-203ENST00000372195 WISP2O76076 250 aa18.52■□□□□ 0.55
RAPGEF1-203ENST00000372195 Q8N1Y9 231 aa18.51■□□□□ 0.55
RAPGEF1-203ENST00000372195 COX7B2Q8TF08 81 aa18.51■□□□□ 0.55
RAPGEF1-203ENST00000372195 FAM167A-AS1Q96KT0 104 aa18.51■□□□□ 0.55
RAPGEF1-203ENST00000372195 C16orf54Q6UWD8 224 aa18.51■□□□□ 0.55
RAPGEF1-203ENST00000372195 LINC01545Q5VT33 79 aa18.51■□□□□ 0.55
RAPGEF1-203ENST00000372195 C5orf47Q569G3 176 aa18.5■□□□□ 0.55
RAPGEF1-203ENST00000372195 Q8N9W7 124 aa18.5■□□□□ 0.55
RAPGEF1-203ENST00000372195 RMI2Q96E14 147 aa18.5■□□□□ 0.55
RAPGEF1-203ENST00000372195 BAALCQ8WXS3 180 aa18.49■□□□□ 0.55
RAPGEF1-203ENST00000372195 NUP210Q8TEM1 1887 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF1-203ENST00000372195 ZFP36P26651 326 aaKnown RBP18.49■□□□□ 0.55
RAPGEF1-203ENST00000372195 C5orf56Q8N8D9 126 aa18.49■□□□□ 0.55
RAPGEF1-203ENST00000372195 PIFOQ8TCI5 191 aa18.48■□□□□ 0.55
RAPGEF1-203ENST00000372195 TEX22C9J3V5 150 aa18.48■□□□□ 0.55
RAPGEF1-203ENST00000372195 ODF3L1Q8IXM7 274 aa18.48■□□□□ 0.55
RAPGEF1-203ENST00000372195 WNK2Q9Y3S1 2297 aa18.48■□□□□ 0.55
RAPGEF1-203ENST00000372195 HIST2H2BCQ6DN03 193 aa18.47■□□□□ 0.55
RAPGEF1-203ENST00000372195 SND1-IT1Q9HBX3 110 aa18.47■□□□□ 0.55
RAPGEF1-203ENST00000372195 WI2-2373I1.2A0A1W2PRP0 233 aa18.47■□□□□ 0.55
RAPGEF1-203ENST00000372195 TAX1BP3O14907 124 aa18.46■□□□□ 0.55
RAPGEF1-203ENST00000372195 CLEC2BQ92478 149 aa18.46■□□□□ 0.55
RAPGEF1-203ENST00000372195 ZMAT4Q9H898 229 aa18.46■□□□□ 0.55
RAPGEF1-203ENST00000372195 TRBV12-3P01733 135 aa18.46■□□□□ 0.55
RAPGEF1-203ENST00000372195 IGHG2P01859 326 aa18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 ATP6V0E2Q8NHE4 81 aa18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 COA6Q5JTJ3 125 aaKnown RBP18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 CAMK2N2Q96S95 79 aa18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 C16orf74Q96GX8 76 aa18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 OPRPNQ99935 248 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 HERV-K104P63124 156 aa18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 DEFB113Q30KQ7 82 aa18.45■□□□□ 0.54
RAPGEF1-203ENST00000372195 ARHGAP21Q5T5U3 1957 aa18.44■□□□□ 0.54
RAPGEF1-203ENST00000372195 ADORA2A-AS1P86434 159 aa18.44■□□□□ 0.54
RAPGEF1-203ENST00000372195 SMIM20Q8N5G0 67 aa18.44■□□□□ 0.54
RAPGEF1-203ENST00000372195 PROP1O75360 226 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms