RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 DENND4CQ5VZ89 1909 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 TECTAO75443 2155 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 K7ERJ3 54 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 TPSG1Q9NRR2 321 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 ADAMTS9Q9P2N4 1935 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 H3BUA1 57 aa10.5□□□□□ -0.73
RAPGEF1-201ENST00000372189 LINC00694P0DN24 101 aa10.5□□□□□ -0.73
RAPGEF1-201ENST00000372189 C11orf53Q8IXP5 236 aa10.5□□□□□ -0.73
RAPGEF1-201ENST00000372189 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
RAPGEF1-201ENST00000372189 C20orf197Q8N268 126 aa10.5□□□□□ -0.73
RAPGEF1-201ENST00000372189 H3BRN7 92 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 Q8NA96 180 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 VSIG2Q96IQ7 327 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 YPEL4Q96NS1 127 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 I3L3M4 83 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 BAALC-AS2P0C853 105 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 SEM1Q6ZVN7 128 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 PRR25Q96S07 402 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 LRRK1Q38SD2 2015 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 NDUFC1O43677 76 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 LHBP01229 141 aa10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 WIPF2Q8TF74 440 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF1-201ENST00000372189 SS18Q15532 418 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 IGHV4-38-2P0DP08 117 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 THAP8Q8NA92 274 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 PLXNB3Q9ULL4 1909 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 YLPM1P49750 1951 aaKnown RBP10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 IGLC1P0CG04 106 aa10.48□□□□□ -0.73
RAPGEF1-201ENST00000372189 LYPD6Q86Y78 171 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 FXYD5Q96DB9 178 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 RHODO00212 210 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 POLEQ07864 2286 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 CACNA1HO95180 2353 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 ZNF493Q6ZR52 646 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 WIPF3A6NGB9 483 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 COA6Q5JTJ3 125 aaKnown RBP10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 F8VRH5 84 aa10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 LOXL1Q08397 574 aaPredicted RBP10.47□□□□□ -0.73
RAPGEF1-201ENST00000372189 IGHV1OR15-1A0A075B7D0 117 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 KRTAP27-1Q3LI81 207 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 LINC00643Q86TS7 51 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 ZMAT4Q9H898 229 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 PCNX2A6NKB5 2137 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.73
RAPGEF1-201ENST00000372189 COL4A3Q01955 1670 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 TMEM89A2RUT3 159 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 WT1-ASQ06250 92 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 Q6ZVH6 145 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 TRAV26-2A0A0B4J265 109 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 IGHV7-4-1A0A0J9YVY3 117 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 LTAP01374 205 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 ZNRF2Q8NHG8 242 aa10.46□□□□□ -0.74
RAPGEF1-201ENST00000372189 HEATR5AQ86XA9 2040 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 ZFHX2Q9C0A1 2572 aaPredicted RBP10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 CCL24O00175 119 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 PRR20EP86478 221 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 PRR20CP86479 221 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 PRR20DP86480 221 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 PRR20BP86481 221 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 PRR20AP86496 221 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 FBXL19-AS1Q494R0 122 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 SDHAF1A6NFY7 115 aa10.45□□□□□ -0.74
RAPGEF1-201ENST00000372189 USF3Q68DE3 2245 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 MT-ATP8P03928 68 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 CFHR3Q02985 330 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 WFDC2Q14508 124 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 ORMDL1Q9P0S3 153 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 SHISA2Q6UWI4 295 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 HIST2H2BCQ6DN03 193 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 HIST2H2BDQ6DRA6 164 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 C20orf78Q9BR46 151 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 MUC6Q6W4X9 2439 aa10.44□□□□□ -0.74
RAPGEF1-201ENST00000372189 TRAV13-2A0A0B4J235 113 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 IGLL5B9A064 214 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 H3BT86 120 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 ZNF747Q9BV97 191 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 ABCA4P78363 2273 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 FOXE3Q13461 319 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 CFC1BP0CG36 223 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 CFC1P0CG37 223 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 DKK2Q9UBU2 259 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 CASC2Q6XLA1 102 aa10.43□□□□□ -0.74
RAPGEF1-201ENST00000372189 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms