RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BLCAPP62952 87 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 UBE2D3P61077 147 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV5-51A0A0C4DH38 117 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 SMIM9A6NGZ8 99 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 DOCK2Q92608 1830 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 ACANP16112 2415 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 hDV103S1A0JD37 113 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 PROP1O75360 226 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 DOPEY1Q5JWR5 2465 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 RGPD3A6NKT7 1758 aaPredicted RBP2.94□□□□□ -1.94
SYNE1-207ENST00000367255 RGPD4Q7Z3J3 1758 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 RNASE2P10153 161 aaKnown RBP2.94□□□□□ -1.94
SYNE1-207ENST00000367255 LST1O00453 97 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 RNASE4P34096 147 aaKnown RBP2.94□□□□□ -1.94
SYNE1-207ENST00000367255 GFI1Q99684 422 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 ICOSQ9Y6W8 199 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 DIAPH2-AS1Q14236 149 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 TRIP6Q15654 476 aaKnown RBP2.94□□□□□ -1.94
SYNE1-207ENST00000367255 CCDC168Q8NDH2 2452 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 LYZL1Q6UWQ5 148 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 TPSG1Q9NRR2 321 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 IGKV1D-43A0A0B4J1Z2 117 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 A0A0J9YW62 118 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 SMKR1H3BMG3 65 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 FOXF2Q12947 444 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 MYOFQ9NZM1 2061 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.94□□□□□ -1.94
SYNE1-207ENST00000367255 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.94□□□□□ -1.94
SYNE1-207ENST00000367255 RPL28P46779 137 aaKnown RBP2.94□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV4-34P06331 123 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 DEFB121Q5J5C9 76 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 WISP2O76076 250 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV1-8P0DP01 117 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 RPL37AP61513 92 aaKnown RBP2.93□□□□□ -1.94
SYNE1-207ENST00000367255 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF576Q9H609 170 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 B4DSR2 109 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 HCG22E2RYF7 251 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 FLVCR1-AS1Q8TAF5 88 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 FHL1Q13642 323 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 SLC25A45Q8N413 288 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 C17orf98A8MV24 154 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 GPHB5Q86YW7 130 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 BRCA1P38398 1863 aaKnown RBP2.93□□□□□ -1.94
SYNE1-207ENST00000367255 PHF3Q92576 2039 aaKnown RBP2.93□□□□□ -1.94
SYNE1-207ENST00000367255 GBF1Q92538 1859 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 TRAV7A0A075B6U4 112 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 FAM236AA0A1B0GUQ0 79 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 FAM236BA0A1B0GV22 79 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 C15orf65H3BRN8 121 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 HIGD2BQ4VC39 106 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 PRSS33Q8NF86 280 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 TMEM92Q6UXU6 159 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 TMEM61Q8N0U2 210 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 USF3Q68DE3 2245 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 CRYGDP07320 174 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 TRAV8-3A0A0A6YYJ7 113 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 KLK10O43240 276 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 MIR17HGQ75NE6 70 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 MRPL35Q9NZE8 188 aaKnown RBP2.93□□□□□ -1.94
SYNE1-207ENST00000367255 C16orf74Q96GX8 76 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF561-AS1K7EIQ3 104 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 CFHR4Q92496 578 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 USP9YO00507 2555 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-207ENST00000367255 FOXC1Q12948 553 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 MUSTN1Q8IVN3 82 aa2.93□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF706Q9Y5V0 76 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-207ENST00000367255 MGPP08493 103 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 SEC61GP60059 68 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 TDRD15B5MCY1 1934 aaKnown RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 FREM3P0C091 2139 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 CASC2Q6XLA1 102 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 DKK4Q9UBT3 224 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 SRRM4A7MD48 611 aaKnown RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 XIRP1Q702N8 1843 aaKnown RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 ARHGAP21Q5T5U3 1957 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 HOXB4P17483 251 aaPredicted RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 RNASE6Q93091 150 aaKnown RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 C1orf159Q96HA4 380 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 MYCNOSP40205 109 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 LINC01560Q8TB33 94 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 FAM19A5Q7Z5A7 132 aaPredicted RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 C4orf3Q8WVX3 66 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 ARFGEF1Q9Y6D6 1849 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 LAMB2P55268 1798 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 TFF3Q07654 80 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 CCL18P55774 89 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 FBXL19-AS1Q494R0 122 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 ZNRD1Q9P1U0 126 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 NEXN-AS1Q8NBZ9 246 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 STRCQ7RTU9 1775 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 JMJD1CQ15652 2540 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 C4orf51C9J302 202 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 GUSBP11Q6P575 273 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 TMEM223A0PJW6 202 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 DICER1Q9UPY3 1922 aaKnown RBP2.92□□□□□ -1.94
SYNE1-207ENST00000367255 BDP1A6H8Y1 2624 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 EPOPA6NHQ4 379 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 LY75O60449 1722 aa2.92□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV1-18A0A0C4DH31 117 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms