RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 IGLV1-47P01700 117 aa9.24□□□□□ -0.93
CDC42BPA-202ENST00000366764 C1orf159Q96HA4 380 aa9.24□□□□□ -0.93
CDC42BPA-202ENST00000366764 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
CDC42BPA-202ENST00000366764 WI2-2373I1.2A0A1W2PRP0 233 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 FGF6P10767 208 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 MORN5Q5VZ52 161 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 PAX4O43316 350 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 CTSGP08311 255 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 G3V318 75 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 ANXA2RQ3ZCQ2 193 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 MSRB2Q9Y3D2 182 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 BUB3O43684 328 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 TEN1Q86WV5 123 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 HERVK_113P63121 156 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 MLST8Q9BVC4 326 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 IGLL5B9A064 214 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 BRD3OSQ6XYD6 125 aa9.23□□□□□ -0.93
CDC42BPA-202ENST00000366764 TEX22C9J3V5 150 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 BRWD1-AS2P59051 145 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 SELENOKQ9Y6D0 94 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 IGLV2-8P01709 118 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 FOXE3Q13461 319 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 ZNF503Q96F45 646 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 ODF1Q14990 250 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 TRAV13-2A0A0B4J235 113 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 LY6HO94772 140 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 ACYP1P07311 99 aa9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 RNASE8Q8TDE3 154 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-202ENST00000366764 IGKV3D-20A0A0C4DH25 116 aa9.21□□□□□ -0.93
CDC42BPA-202ENST00000366764 C17orf77Q96MU5 243 aa9.21□□□□□ -0.94
CDC42BPA-202ENST00000366764 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
CDC42BPA-202ENST00000366764 JPT2Q9H910 190 aa9.21□□□□□ -0.94
CDC42BPA-202ENST00000366764 IGKV1D-37A0A075B6S9 117 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 ELANEP08246 267 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 IGHV7-81A0A0B4J1V7 117 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 LINC00173Q6ZV60 143 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 PRSS33Q8NF86 280 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 MUC4Q99102 2169 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 TEX48A0A1B0GUV7 120 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
CDC42BPA-202ENST00000366764 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
CDC42BPA-202ENST00000366764 CFC1P0CG37 223 aa9.19□□□□□ -0.94
CDC42BPA-202ENST00000366764 PIFOQ8TCI5 191 aa9.19□□□□□ -0.94
CDC42BPA-202ENST00000366764 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
CDC42BPA-202ENST00000366764 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
CDC42BPA-202ENST00000366764 SS18Q15532 418 aa9.19□□□□□ -0.94
CDC42BPA-202ENST00000366764 C11orf68Q9H3H3 251 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 SPINK13Q1W4C9 94 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 PCSK5Q92824 1860 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 TOMM6Q96B49 74 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 TCF15Q12870 199 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 E9PLD3 99 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 PHLDA1Q8WV24 401 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 CFHR4Q92496 578 aa9.18□□□□□ -0.94
CDC42BPA-202ENST00000366764 CITED1Q99966 193 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 G3V4G9 280 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 ASPHD1Q5U4P2 390 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 SPRNQ5BIV9 151 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 CENPVL3A0A0U1RRI6 287 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 PROP1O75360 226 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE7O76087 117 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE4Q13068 117 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 FBXL19-AS1Q494R0 122 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 TMEM243Q9BU79 118 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 FXYD2P54710 66 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
CDC42BPA-202ENST00000366764 C16orf54Q6UWD8 224 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 WFDC12Q8WWY7 111 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 SOCS3O14543 225 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 LCNL1Q6ZST4 164 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 DEFB131AP59861 70 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 PRR30Q53SZ7 412 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-202ENST00000366764 LINC01619G3V211 115 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 U3KQK5 164 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 HERV-K104P63124 156 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 SEM1Q6ZVN7 128 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 K7EMT4 169 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 MYCNOSP40205 109 aa9.15□□□□□ -0.94
CDC42BPA-202ENST00000366764 NPC2P61916 151 aa9.15□□□□□ -0.95
CDC42BPA-202ENST00000366764 TM2D2Q9BX73 214 aa9.15□□□□□ -0.95
CDC42BPA-202ENST00000366764 RITA1Q96K30 269 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms