RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 CST7O76096 145 aa-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 S100A5P33763 92 aa-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 AKR1C8PQ5T2L2 129 aa-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 CMSS1Q9BQ75 279 aaKnown RBP-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 POLE3Q9NRF9 147 aa-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 SPANXB1Q9NS25 103 aaPredicted RBP-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 AQRO60306 1485 aaKnown RBP eCLIP-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 ABCC10Q5T3U5 1492 aa-5.03□□□□□ -3.21
RNU6-838P-201ENST00000363399 M0R135 149 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 RER1O15258 196 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 EDF1O60869 148 aaKnown RBP-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 DYNLT3P51808 116 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 MLLT11Q13015 90 aaPredicted RBP-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 C9orf116Q5BN46 136 aaPredicted RBP-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 SPANXN2Q5MJ10 180 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 SSX6Q7RTT6 188 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 OR6N2Q8NGY6 317 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 ATP6V1E2Q96A05 226 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 MOSPD1Q9UJG1 213 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 BLOC1S6Q9UL45 172 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 PCNTO95613 3336 aa-5.04□□□□□ -3.22
RNU6-838P-201ENST00000363399 DAPL1A0PJW8 107 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 TMEM256-PLSCR3K7ERE1 68 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 K7ERJ3 54 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 KPNA4O00629 521 aaPredicted RBP-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 TRACP01848 142 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 RPS17P08708 135 aaKnown RBP-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 LIMS3P0CW19 117 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 LIMS4P0CW20 117 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 SMIM10L2AP0DMW4 78 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 SMIM10L2BP0DMW5 78 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 CYBAP13498 195 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 TMEM170BQ5T4T1 132 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 C6orf183Q5T699 404 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 CENPQQ7L2Z9 268 aaPredicted RBP-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 FAM228AQ86W67 206 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 COMMD1Q8N668 190 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 FAM216BQ8N7L0 139 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 FAM81AQ8TBF8 368 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 PRELID3AQ96N28 172 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 UQCC1Q9NVA1 299 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 GCNT4Q9P109 453 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 ASB4Q9Y574 426 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 TMEM56-RWDD3S4R434 201 aa-5.05□□□□□ -3.22
RNU6-838P-201ENST00000363399 A0A087WUJ7 227 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 FAM223BA6NKX1 122 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 ATP5HO75947 161 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 BTG2P78543 158 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 ZNF818PQ6ZRF7 136 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 SYCE1Q8N0S2 351 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 CCDC12Q8WUD4 166 aaPredicted RBP-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 C2orf50Q96LR7 162 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 RMND1Q9NWS8 449 aa-5.06□□□□□ -3.22
RNU6-838P-201ENST00000363399 GAP43P17677 238 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 PEX19P40855 299 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 RPS20P60866 119 aaKnown RBP-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 BCL2L15Q5TBC7 163 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 CST9Q5W186 159 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 MRPL52Q86TS9 123 aaKnown RBP-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 TMEM86BQ8N661 226 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 STOML3Q8TAV4 291 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 BRK1Q8WUW1 75 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 CLEC2BQ92478 149 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 MPC1Q9Y5U8 109 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 PTPRGP23470 1445 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 TRAPPC8Q9Y2L5 1435 aa-5.07□□□□□ -3.22
RNU6-838P-201ENST00000363399 N4BP2Q86UW6 1770 aaPredicted RBP-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 TRAV26-2A0A0B4J265 109 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 CLPSL1A2RUU4 121 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 EIF3JO75822 258 aaKnown RBP-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 IFNA21P01568 189 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 HLA-DRB1P01911 266 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 AP3S2P59780 193 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 LRRC23Q53EV4 343 aaPredicted RBP-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 IFT81Q8WYA0 676 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 VPS25Q9BRG1 176 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 C20orf27Q9GZN8 174 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 MAP1LC3AQ9H492 121 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 AHSPQ9NZD4 102 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 ERG28Q9UKR5 140 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 RIMS2Q9UQ26 1411 aa-5.08□□□□□ -3.22
RNU6-838P-201ENST00000363399 CTXND1A0A1B0GTU2 59 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 CCL22O00626 93 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 IFNA5P01569 189 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 GTF2A1P52655 376 aaPredicted RBP-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 HADHBP55084 474 aaKnown RBP-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 NDUFA6P56556 154 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 EIF3MQ7L2H7 374 aaKnown RBP-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 ARL6IP6Q8N6S5 226 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 PP6455Q8WZ26 134 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 TEX37Q96LM6 180 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 PRTFDC1Q9NRG1 225 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 NCOA3Q9Y6Q9 1424 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 PTPRMP28827 1452 aa-5.09□□□□□ -3.22
RNU6-838P-201ENST00000363399 ABCC9O60706 1549 aa-5.1□□□□□ -3.23
RNU6-838P-201ENST00000363399 WBP4O75554 376 aaKnown RBP-5.1□□□□□ -3.23
RNU6-838P-201ENST00000363399 ADCYAP1P18509 176 aa-5.1□□□□□ -3.23
RNU6-838P-201ENST00000363399 CCL18P55774 89 aa-5.1□□□□□ -3.23
RNU6-838P-201ENST00000363399 WRNQ14191 1432 aaPredicted RBP eCLIP-5.1□□□□□ -3.23
RNU6-838P-201ENST00000363399 DCUN1D5Q9BTE7 237 aa-5.1□□□□□ -3.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms