RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PLEKHB2Q96CS7 222 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 U3KQE9 123 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 IGKV1D-37A0A075B6S9 117 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 SS18Q15532 418 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 PIFOQ8TCI5 191 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 FN1P02751 2386 aaKnown RBP10.67□□□□□ -0.7
CTR9-201ENST00000361367 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 NEGR1Q7Z3B1 354 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 DLX4Q92988 240 aaPredicted RBP10.67□□□□□ -0.7
CTR9-201ENST00000361367 NHP2Q9NX24 153 aaKnown RBP10.67□□□□□ -0.7
CTR9-201ENST00000361367 SPRY2O43597 315 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 NPYP01303 97 aa10.67□□□□□ -0.7
CTR9-201ENST00000361367 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 COL4A2P08572 1712 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
CTR9-201ENST00000361367 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
CTR9-201ENST00000361367 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
CTR9-201ENST00000361367 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
CTR9-201ENST00000361367 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 CRYGBP07316 175 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
CTR9-201ENST00000361367 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
CTR9-201ENST00000361367 PAX4O43316 350 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 CBY1Q9Y3M2 126 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 MTORP42345 2549 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 KRTAP10-9P60411 292 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 NDUFAF3Q9BU61 184 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 A0A1W2PPR1 153 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 IGLC2P0DOY2 106 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 DEFB1P60022 68 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 RNF152Q8N8N0 203 aa10.65□□□□□ -0.7
CTR9-201ENST00000361367 ZNF493Q6ZR52 646 aa10.65□□□□□ -0.71
CTR9-201ENST00000361367 A0A096LPF7 62 aa10.64□□□□□ -0.71
CTR9-201ENST00000361367 TMEM238C9JI98 176 aa10.64□□□□□ -0.71
CTR9-201ENST00000361367 K7ERU9 68 aa10.64□□□□□ -0.71
CTR9-201ENST00000361367 Q6ZSV7 163 aa10.64□□□□□ -0.71
CTR9-201ENST00000361367 SIGLEC8Q9NYZ4 499 aa10.64□□□□□ -0.71
CTR9-201ENST00000361367 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 POLQO75417 2590 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 LINC00587B1AMM8 73 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 LY6G6DO95868 133 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 GAGE6Q13070 117 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 RHOHQ15669 191 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 SFTA2Q6UW10 78 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 PCNTO95613 3336 aa10.63□□□□□ -0.71
CTR9-201ENST00000361367 INSL3P51460 131 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 PRIMA1Q86XR5 153 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 CHAC1Q9BUX1 264 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 A0A0J9YY99 117 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 BBC3Q96PG8 261 aaPredicted RBP10.62□□□□□ -0.71
CTR9-201ENST00000361367 KLF12Q9Y4X4 402 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 HLA-DRB4X5D2U9 266 aa10.62□□□□□ -0.71
CTR9-201ENST00000361367 A0A087X0K7 114 aa10.61□□□□□ -0.71
CTR9-201ENST00000361367 HSD52Q0P140 79 aa10.61□□□□□ -0.71
CTR9-201ENST00000361367 ADAMTSL5Q6ZMM2 481 aa10.61□□□□□ -0.71
CTR9-201ENST00000361367 KLF5Q13887 457 aaPredicted RBP10.61□□□□□ -0.71
CTR9-201ENST00000361367 PMVKQ15126 192 aa10.61□□□□□ -0.71
CTR9-201ENST00000361367 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
CTR9-201ENST00000361367 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 CHD7Q9P2D1 2997 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 NPC2P61916 151 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 NDUFA11Q86Y39 141 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 PRRC2CQ9Y520 2896 aaKnown RBP10.6□□□□□ -0.71
CTR9-201ENST00000361367 H3BUT2 72 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 STPG4Q8N801 248 aa10.6□□□□□ -0.71
CTR9-201ENST00000361367 C10orf99Q6UWK7 81 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 Q8N1Y9 231 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 MSRB1Q9NZV6 116 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 A0A0J9YX75 114 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 SPART-AS1P0CW21 52 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 S100A7L2Q5SY68 101 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 Q8N6K4 173 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 SPCS1Q9Y6A9 102 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 DOPEY1Q5JWR5 2465 aa10.59□□□□□ -0.71
CTR9-201ENST00000361367 IGHV1-24A0A0C4DH33 117 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 SLC25A20O43772 301 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 AVPP01185 164 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 A0A1B0GV90 55 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 JPT2Q9H910 190 aa10.58□□□□□ -0.72
CTR9-201ENST00000361367 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
CTR9-201ENST00000361367 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
CTR9-201ENST00000361367 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
CTR9-201ENST00000361367 RANBP2P49792 3224 aaKnown RBP10.57□□□□□ -0.72
CTR9-201ENST00000361367 HTTP42858 3142 aa10.57□□□□□ -0.72
CTR9-201ENST00000361367 VWC2LB2RUY7 222 aa10.57□□□□□ -0.72
CTR9-201ENST00000361367 LGALS9O00182 355 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms