RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 LINC00158P58513 81 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 I3L3M4 83 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 GNRH2O43555 120 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 OTOGLQ3ZCN5 2332 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 ATP5J2P56134 94 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 GATD1Q8NB37 220 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 IGFBPL1Q8WX77 278 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 CLUHP3Q96NS8 147 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 CPAMD8Q8IZJ3 1885 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 ATRXP46100 2492 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 IGLV11-55A0A075B6I3 123 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 CTSGP08311 255 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 DKK4Q9UBT3 224 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
CLSTN1-201ENST00000361311 DAZ1Q9NQZ3 744 aaKnown RBP12.4□□□□□ -0.42
CLSTN1-201ENST00000361311 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
CLSTN1-201ENST00000361311 PHLDA1Q8WV24 401 aaPredicted RBP12.4□□□□□ -0.42
CLSTN1-201ENST00000361311 USMG5Q96IX5 58 aa12.4□□□□□ -0.42
CLSTN1-201ENST00000361311 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
CLSTN1-201ENST00000361311 CRIP1P50238 77 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 TRAV13-1A0A0B4J241 112 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 LEPROTO15243 131 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 MUSTN1Q8IVN3 82 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 MRPL53Q96EL3 112 aaKnown RBP12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 ZFP2Q6ZN57 461 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 LINC00574Q9H8X3 128 aa12.39□□□□□ -0.43
CLSTN1-201ENST00000361311 KNCNA6PVL3 124 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 IGHG4P01861 327 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 IGLC6P0CF74 106 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 BUB3O43684 328 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 TCL1BO95988 128 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 BRD3OSQ6XYD6 125 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 NDUFA11Q86Y39 141 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 F6UB75 175 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 NBL1P41271 181 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 PLA2G2CQ5R387 149 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 SPANXDQ9BXN6 97 aa12.38□□□□□ -0.43
CLSTN1-201ENST00000361311 PAX4O43316 350 aa12.37□□□□□ -0.43
CLSTN1-201ENST00000361311 IGLV1-47P01700 117 aa12.37□□□□□ -0.43
CLSTN1-201ENST00000361311 KLK9Q9UKQ9 250 aa12.37□□□□□ -0.43
CLSTN1-201ENST00000361311 NACAE9PAV3 2078 aa12.37□□□□□ -0.43
CLSTN1-201ENST00000361311 SPINK13Q1W4C9 94 aa12.37□□□□□ -0.43
CLSTN1-201ENST00000361311 IGLV2-11P01706 119 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 SPATA25Q9BR10 227 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 H3BUX3 64 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 WISP2O76076 250 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 PIFOQ8TCI5 191 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 PTPN13Q12923 2485 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 U3KQK5 164 aa12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 RPL39P62891 51 aaKnown RBP12.36□□□□□ -0.43
CLSTN1-201ENST00000361311 UBE2E1P51965 193 aa12.35□□□□□ -0.43
CLSTN1-201ENST00000361311 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
CLSTN1-201ENST00000361311 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
CLSTN1-201ENST00000361311 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
CLSTN1-201ENST00000361311 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
CLSTN1-201ENST00000361311 INSL3P51460 131 aa12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 C3orf56Q8N813 242 aa12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 IGHV1OR15-1A0A075B7D0 117 aa12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 NDUFA4O00483 81 aa12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 RHOHQ15669 191 aa12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 WT1P19544 449 aaPredicted RBP12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
CLSTN1-201ENST00000361311 MYO18BQ8IUG5 2567 aa12.33□□□□□ -0.43
CLSTN1-201ENST00000361311 TMEM86BQ8N661 226 aa12.33□□□□□ -0.44
CLSTN1-201ENST00000361311 NPBQ8NG41 125 aa12.33□□□□□ -0.44
CLSTN1-201ENST00000361311 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
CLSTN1-201ENST00000361311 FANCD2OSQ96PS1 177 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 SPRY4Q9C004 299 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 IGHV7-81A0A0B4J1V7 117 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 NDUFV3P56181 108 aaKnown RBP12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 S100A7L2Q5SY68 101 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 TRBV10-2A0A0K0K1G8 114 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 FAM236AA0A1B0GUQ0 79 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 FAM236BA0A1B0GV22 79 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 IGF2RP11717 2491 aa12.32□□□□□ -0.44
CLSTN1-201ENST00000361311 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 C10orf142B7Z368 130 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 IGFL3Q6UXB1 125 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 ICOSQ9Y6W8 199 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 BPTFQ12830 3046 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 SEM1Q6ZVN7 128 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 HERV-K104P63124 156 aa12.31□□□□□ -0.44
CLSTN1-201ENST00000361311 RNF185Q96GF1 192 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 CCL19Q99731 98 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 TRACP01848 142 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms