RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 FXYD7P58549 80 aa15.43■□□□□ 0.06
MAP1LC3A-201ENST00000360668 C18orf32Q8TCD1 76 aa15.43■□□□□ 0.06
MAP1LC3A-201ENST00000360668 NUPR1O60356 82 aa15.42■□□□□ 0.06
MAP1LC3A-201ENST00000360668 S100A4P26447 101 aaKnown RBP15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 LINC00310P59036 64 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 VWFP04275 2813 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 IGHV1OR15-1A0A075B7D0 117 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 MUC21A0A0G2JKD1 596 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 MUC21A0A140T8X8 626 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 H3BVH4 76 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 GNRH2O43555 120 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 NTF3P20783 257 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 CACNG7P62955 275 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 TWIST1Q15672 202 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 C20orf144Q9BQM9 153 aa15.41■□□□□ 0.06
MAP1LC3A-201ENST00000360668 IGHV4-4A0A075B6R2 117 aa15.4■□□□□ 0.06
MAP1LC3A-201ENST00000360668 WIPF1O43516 503 aa15.4■□□□□ 0.06
MAP1LC3A-201ENST00000360668 SCRT2Q9NQ03 307 aa15.4■□□□□ 0.06
MAP1LC3A-201ENST00000360668 NUTF2P61970 127 aaKnown RBP15.39■□□□□ 0.05
MAP1LC3A-201ENST00000360668 JOSD1Q15040 202 aaPredicted RBP15.39■□□□□ 0.05
MAP1LC3A-201ENST00000360668 PYY3Q5JQD4 70 aa15.39■□□□□ 0.05
MAP1LC3A-201ENST00000360668 FAM104BQ5XKR9 115 aa15.39■□□□□ 0.05
MAP1LC3A-201ENST00000360668 GTSCR1Q86UQ5 136 aa15.39■□□□□ 0.05
MAP1LC3A-201ENST00000360668 TMEM191AQ9H0A3 160 aa15.39■□□□□ 0.05
MAP1LC3A-201ENST00000360668 INSP01308 110 aa15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 RBMY1A1P0DJD3 496 aaKnown RBP15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 RBMY1CP0DJD4 496 aa15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 RNASE3P12724 160 aaKnown RBP15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 RBMY1FQ15415 496 aaKnown RBP15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 OR10AG1Q8NH19 301 aa15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 WFDC10AQ9H1F0 79 aa15.38■□□□□ 0.05
MAP1LC3A-201ENST00000360668 IGLL1P15814 213 aa15.37■□□□□ 0.05
MAP1LC3A-201ENST00000360668 SSTP61278 116 aa15.37■□□□□ 0.05
MAP1LC3A-201ENST00000360668 U3KQK5 164 aa15.37■□□□□ 0.05
MAP1LC3A-201ENST00000360668 SPANXN1Q5VSR9 72 aa15.36■□□□□ 0.05
MAP1LC3A-201ENST00000360668 IGHV3-16A0A0C4DH30 117 aa15.36■□□□□ 0.05
MAP1LC3A-201ENST00000360668 LINC00467Q9BRT7 94 aa15.36■□□□□ 0.05
MAP1LC3A-201ENST00000360668 MSRB1Q9NZV6 116 aa15.36■□□□□ 0.05
MAP1LC3A-201ENST00000360668 PHLDA3Q9Y5J5 127 aa15.36■□□□□ 0.05
MAP1LC3A-201ENST00000360668 TIMM8BQ9Y5J9 83 aaPredicted RBP15.36■□□□□ 0.05
MAP1LC3A-201ENST00000360668 TRGV11A0A075B6L2 103 aa15.35■□□□□ 0.05
MAP1LC3A-201ENST00000360668 Q8N1Y9 231 aa15.35■□□□□ 0.05
MAP1LC3A-201ENST00000360668 CHCHD1Q96BP2 118 aaKnown RBP15.35■□□□□ 0.05
MAP1LC3A-201ENST00000360668 SAMD10Q9BYL1 202 aa15.35■□□□□ 0.05
MAP1LC3A-201ENST00000360668 NIT2Q9NQR4 276 aa15.35■□□□□ 0.05
MAP1LC3A-201ENST00000360668 TRRAPQ9Y4A5 3859 aa15.35■□□□□ 0.05
MAP1LC3A-201ENST00000360668 MORN3Q6PF18 240 aaPredicted RBP15.34■□□□□ 0.05
MAP1LC3A-201ENST00000360668 NIT1Q86X76 327 aa15.34■□□□□ 0.05
MAP1LC3A-201ENST00000360668 RCHY1Q96PM5 261 aa15.34■□□□□ 0.05
MAP1LC3A-201ENST00000360668 XCL2Q9UBD3 114 aa15.34■□□□□ 0.05
MAP1LC3A-201ENST00000360668 PPBPP02775 128 aa15.33■□□□□ 0.05
MAP1LC3A-201ENST00000360668 IQCJQ1A5X6 159 aa15.33■□□□□ 0.05
MAP1LC3A-201ENST00000360668 PRR31Q5SQ13 230 aa15.33■□□□□ 0.05
MAP1LC3A-201ENST00000360668 DEFB125Q8N687 156 aa15.33■□□□□ 0.05
MAP1LC3A-201ENST00000360668 C9orf85Q96MD7 179 aa15.33■□□□□ 0.05
MAP1LC3A-201ENST00000360668 NOTCH3Q9UM47 2321 aa15.33■□□□□ 0.04
MAP1LC3A-201ENST00000360668 CBY3A6NI87 242 aa15.32■□□□□ 0.04
MAP1LC3A-201ENST00000360668 NXPH4O95158 308 aa15.32■□□□□ 0.04
MAP1LC3A-201ENST00000360668 SMIM15Q7Z3B0 74 aa15.32■□□□□ 0.04
MAP1LC3A-201ENST00000360668 PMCHP20382 165 aa15.32■□□□□ 0.04
MAP1LC3A-201ENST00000360668 LINC01587Q99440 93 aa15.32■□□□□ 0.04
MAP1LC3A-201ENST00000360668 MDFICQ9P1T7 246 aa15.32■□□□□ 0.04
MAP1LC3A-201ENST00000360668 NBEAL1Q6ZS30 2694 aa15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 HSBP1O75506 76 aa15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 RPL35AP18077 110 aaKnown RBP15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 MRPL51Q4U2R6 128 aaKnown RBP15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 AMN1Q8IY45 258 aa15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 ORMDL3Q8N138 153 aa15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 C1QTNF4Q9BXJ3 329 aa15.31■□□□□ 0.04
MAP1LC3A-201ENST00000360668 M0R381 172 aa15.3■□□□□ 0.04
MAP1LC3A-201ENST00000360668 GIG44P09565 113 aaPredicted RBP15.3■□□□□ 0.04
MAP1LC3A-201ENST00000360668 LINC00614P0C842 121 aa15.3■□□□□ 0.04
MAP1LC3A-201ENST00000360668 AMTP48728 403 aa15.3■□□□□ 0.04
MAP1LC3A-201ENST00000360668 S100A12P80511 92 aa15.3■□□□□ 0.04
MAP1LC3A-201ENST00000360668 LAMTOR2Q9Y2Q5 125 aa15.3■□□□□ 0.04
MAP1LC3A-201ENST00000360668 RAB4AP20338 218 aa15.29■□□□□ 0.04
MAP1LC3A-201ENST00000360668 C1orf158Q8N1D5 194 aa15.29■□□□□ 0.04
MAP1LC3A-201ENST00000360668 SPRY2O43597 315 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 URB1-AS1Q96HZ7 61 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 PRELID3AQ96N28 172 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 EVI2AP22794 236 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 PKD1L1Q8TDX9 2849 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 RNF185Q96GF1 192 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 TMEM208Q9BTX3 173 aa15.28■□□□□ 0.04
MAP1LC3A-201ENST00000360668 MUC4Q99102 2169 aa15.27■□□□□ 0.04
MAP1LC3A-201ENST00000360668 HTN1P15515 57 aa15.27■□□□□ 0.03
MAP1LC3A-201ENST00000360668 CKS2P33552 79 aa15.27■□□□□ 0.03
MAP1LC3A-201ENST00000360668 RNASEKQ6P5S7 137 aaKnown RBP15.27■□□□□ 0.03
MAP1LC3A-201ENST00000360668 Q6ZWC4 215 aa15.27■□□□□ 0.03
MAP1LC3A-201ENST00000360668 SYT8Q8NBV8 401 aa15.27■□□□□ 0.03
MAP1LC3A-201ENST00000360668 D6R8Y8 96 aa15.26■□□□□ 0.03
MAP1LC3A-201ENST00000360668 ZNF415Q09FC8 603 aa15.26■□□□□ 0.03
MAP1LC3A-201ENST00000360668 AP1S3Q96PC3 154 aa15.26■□□□□ 0.03
MAP1LC3A-201ENST00000360668 GOLT1BQ9Y3E0 138 aa15.26■□□□□ 0.03
MAP1LC3A-201ENST00000360668 CSTL1Q9H114 145 aa15.25■□□□□ 0.03
MAP1LC3A-201ENST00000360668 CSNK1G2-AS1Q8NCQ2 148 aa15.24■□□□□ 0.03
MAP1LC3A-201ENST00000360668 DPH3P1Q9H4G8 78 aa15.24■□□□□ 0.03
MAP1LC3A-201ENST00000360668 CMYA5Q8N3K9 4069 aa15.24■□□□□ 0.03
MAP1LC3A-201ENST00000360668 PRSS3P2Q8NHM4 247 aa15.24■□□□□ 0.03
MAP1LC3A-201ENST00000360668 OXLD1Q5BKU9 147 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms