RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ERVFC1-1P60608 527 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 ZFAND6Q6FIF0 208 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 COMMD7Q86VX2 200 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 C15orf54Q8N8G6 183 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 NUDT10Q8NFP7 164 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 NUDT11Q96G61 164 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 RPP21Q9H633 154 aaKnown RBP11.35□□□□□ -0.59
FDPS-201ENST00000356657 OSTCQ9NRP0 149 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
FDPS-201ENST00000356657 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 H3BVH4 76 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 GAGE7O76087 117 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 GAGE12FP0CL80 117 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 GAGE12GP0CL81 117 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 GAGE12IP0CL82 117 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
FDPS-201ENST00000356657 CEMP1Q6PRD7 247 aaPredicted RBP11.34□□□□□ -0.59
FDPS-201ENST00000356657 SSBP4Q9BWG4 385 aaPredicted RBP11.34□□□□□ -0.59
FDPS-201ENST00000356657 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 A8MWL6 223 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 F2Z2F3 143 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 SNAI2O43623 268 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
FDPS-201ENST00000356657 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
FDPS-201ENST00000356657 CASC10Q5T4H9 136 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 ZFP82Q8N141 532 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
FDPS-201ENST00000356657 RNASE7Q9H1E1 156 aaKnown RBP11.33□□□□□ -0.6
FDPS-201ENST00000356657 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
FDPS-201ENST00000356657 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 GATCO43716 136 aaKnown RBP11.32□□□□□ -0.6
FDPS-201ENST00000356657 SLAQ13239 276 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 ADIRFQ15847 76 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 ZNF575Q86XF7 245 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 CSMD3Q7Z407 3707 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 TRAV4A0A0B4J268 109 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 TMEM218A2RU14 115 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 A8MWV9 139 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
FDPS-201ENST00000356657 NXPH4O95158 308 aa11.31□□□□□ -0.6
FDPS-201ENST00000356657 SEC11CQ9BY50 192 aa11.31□□□□□ -0.6
FDPS-201ENST00000356657 CACNG7P62955 275 aa11.3□□□□□ -0.6
FDPS-201ENST00000356657 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
FDPS-201ENST00000356657 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
FDPS-201ENST00000356657 H3BNG1 76 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 RHODO00212 210 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 PPP1R2P9O14990 202 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 CTRLP40313 264 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
FDPS-201ENST00000356657 F5H768 121 aa11.28□□□□□ -0.6
FDPS-201ENST00000356657 F8W036 122 aa11.28□□□□□ -0.6
FDPS-201ENST00000356657 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
FDPS-201ENST00000356657 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
FDPS-201ENST00000356657 TSKUQ8WUA8 353 aa11.28□□□□□ -0.6
FDPS-201ENST00000356657 TENM2Q9NT68 2774 aa11.28□□□□□ -0.6
FDPS-201ENST00000356657 IGHV4-4A0A075B6R2 117 aa11.27□□□□□ -0.6
FDPS-201ENST00000356657 M0R381 172 aa11.27□□□□□ -0.6
FDPS-201ENST00000356657 RS1O15537 224 aa11.27□□□□□ -0.6
FDPS-201ENST00000356657 HTN3P15516 51 aa11.27□□□□□ -0.6
FDPS-201ENST00000356657 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.6
FDPS-201ENST00000356657 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.6
FDPS-201ENST00000356657 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
FDPS-201ENST00000356657 OR10AG1Q8NH19 301 aa11.26□□□□□ -0.61
FDPS-201ENST00000356657 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
FDPS-201ENST00000356657 PRO0255Q9UI72 69 aa11.26□□□□□ -0.61
FDPS-201ENST00000356657 V9GYV3 84 aa11.26□□□□□ -0.61
FDPS-201ENST00000356657 MT-ND4LP03901 98 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 GZMBP10144 247 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 ANAPC16Q96DE5 110 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
FDPS-201ENST00000356657 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 IGLL5B9A064 214 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 ADCYAP1P18509 176 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 S100A1P23297 94 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 C10orf91Q5T1B1 145 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
FDPS-201ENST00000356657 HOXA5P20719 270 aa11.24□□□□□ -0.61
FDPS-201ENST00000356657 FHL2Q14192 279 aa11.24□□□□□ -0.61
FDPS-201ENST00000356657 GTSF1Q8WW33 167 aa11.24□□□□□ -0.61
FDPS-201ENST00000356657 NAT8BQ9UHF3 227 aa11.24□□□□□ -0.61
FDPS-201ENST00000356657 HHLA3Q9XRX5 114 aa11.24□□□□□ -0.61
FDPS-201ENST00000356657 CARHSP1Q9Y2V2 147 aaKnown RBP11.24□□□□□ -0.61
FDPS-201ENST00000356657 STARD9Q9P2P6 4700 aa11.24□□□□□ -0.61
FDPS-201ENST00000356657 HIGD1CA8MV81 97 aa11.23□□□□□ -0.61
FDPS-201ENST00000356657 SMIM17P0DL12 118 aa11.23□□□□□ -0.61
FDPS-201ENST00000356657 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms