RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
CKLF-202ENST00000345436 TRAV34A0A0B4J273 112 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 FAM74A7A6NL05 159 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 PSCAO43653 123 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 KRTAP10-2P60368 255 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 UBE2G1P62253 170 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 ZNF726P1Q15940 193 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
CKLF-202ENST00000345436 ZNF506Q5JVG8 444 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 SYT8Q8NBV8 401 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 FMC1Q96HJ9 113 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 LINC00479Q96M42 142 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
CKLF-202ENST00000345436 LOC100131303A0A0U1RQF7 123 aa12.07□□□□□ -0.48
CKLF-202ENST00000345436 PGPEP1LA6NFU8 196 aa12.07□□□□□ -0.48
CKLF-202ENST00000345436 B4DEV8 164 aa12.07□□□□□ -0.48
CKLF-202ENST00000345436 FHITP49789 147 aa12.07□□□□□ -0.48
CKLF-202ENST00000345436 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
CKLF-202ENST00000345436 ATP6V0E2Q8NHE4 81 aa12.07□□□□□ -0.48
CKLF-202ENST00000345436 IGHV3-73A0A0B4J1V6 119 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
CKLF-202ENST00000345436 LINC01556Q5JQF7 62 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 FAM162BQ5T6X4 162 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 LELP1Q5T871 98 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 PCLOQ9Y6V0 5065 aa12.06□□□□□ -0.48
CKLF-202ENST00000345436 UMAD1C9J7I0 102 aa12.05□□□□□ -0.48
CKLF-202ENST00000345436 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
CKLF-202ENST00000345436 Q86TA4 180 aa12.05□□□□□ -0.48
CKLF-202ENST00000345436 A0A087WTM6 91 aa12.04□□□□□ -0.48
CKLF-202ENST00000345436 IGKV3D-20A0A0C4DH25 116 aa12.04□□□□□ -0.48
CKLF-202ENST00000345436 RHODO00212 210 aa12.04□□□□□ -0.48
CKLF-202ENST00000345436 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
CKLF-202ENST00000345436 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
CKLF-202ENST00000345436 Q8N1X5 172 aa12.04□□□□□ -0.48
CKLF-202ENST00000345436 A0A087WWC5 75 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 A0A0D9SG52 128 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 ZNF345Q14585 488 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 PARLQ9H300 379 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
CKLF-202ENST00000345436 KANTRA0A1W2PQU2 76 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 IBA57-AS1B1ANH7 110 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 SEC11BP0C7V7 166 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 AKR1C3P42330 323 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 TM2D2Q9BX73 214 aa12.02□□□□□ -0.49
CKLF-202ENST00000345436 RYR1P21817 5038 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 PFDN1O60925 122 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 ARMS2P0C7Q2 107 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 TPT1P13693 172 aaKnown RBP12.01□□□□□ -0.49
CKLF-202ENST00000345436 TOR2AQ5JU69 321 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 SFT2D1Q8WV19 159 aa12.01□□□□□ -0.49
CKLF-202ENST00000345436 G3V3Q6 166 aa12□□□□□ -0.49
CKLF-202ENST00000345436 H3BVH4 76 aa12□□□□□ -0.49
CKLF-202ENST00000345436 M0R036 132 aa12□□□□□ -0.49
CKLF-202ENST00000345436 SH2D1AO60880 128 aa12□□□□□ -0.49
CKLF-202ENST00000345436 ZC2HC1AQ96GY0 325 aa12□□□□□ -0.49
CKLF-202ENST00000345436 GAGE12JA6NER3 117 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 LTAP01374 205 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 GAGE1Q13065 139 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 GAGE4Q13068 117 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 GAGE5Q13069 117 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 LAGE3Q14657 143 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 ZNF674Q2M3X9 581 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 GAGE13Q4V321 117 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 ZFP82Q8N141 532 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 FAM213BQ8TBF2 198 aa11.99□□□□□ -0.49
CKLF-202ENST00000345436 ZNF471Q9BX82 626 aaPredicted RBP11.99□□□□□ -0.49
CKLF-202ENST00000345436 PAGE4O60829 102 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 IGHV3-33P01772 117 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 CRIP1P50238 77 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
CKLF-202ENST00000345436 MBD3L1Q8WWY6 194 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
CKLF-202ENST00000345436 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
CKLF-202ENST00000345436 GRIFINA4D1Z8 144 aa11.97□□□□□ -0.49
CKLF-202ENST00000345436 GCSHP23434 173 aa11.97□□□□□ -0.49
CKLF-202ENST00000345436 Q9HAA7 133 aa11.97□□□□□ -0.49
CKLF-202ENST00000345436 SMLR1H3BR10 107 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 BCL2L11O43521 198 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 H2AFB1P0C5Y9 115 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms