RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LY6G6CO95867 125 aa9.89□□□□□ -0.83
TPM4-202ENST00000344824 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
TPM4-202ENST00000344824 CBLN2Q8IUK8 224 aa9.89□□□□□ -0.83
TPM4-202ENST00000344824 KCNS1Q96KK3 526 aa9.89□□□□□ -0.83
TPM4-202ENST00000344824 PYGO2Q9BRQ0 406 aa9.89□□□□□ -0.83
TPM4-202ENST00000344824 IL36BQ9NZH7 164 aa9.89□□□□□ -0.83
TPM4-202ENST00000344824 URGCP-MRPS24S4R325 110 aa9.89□□□□□ -0.83
TPM4-202ENST00000344824 H3BVH4 76 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 S100A4P26447 101 aaKnown RBP9.88□□□□□ -0.83
TPM4-202ENST00000344824 ASIPP42127 132 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 SSTP61278 116 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 RRN3P1Q2M238 152 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 CT83Q5H943 113 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 TMEM256Q8N2U0 113 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 TSKUQ8WUA8 353 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 PGLYRP4Q96LB8 373 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 NEU1Q99519 415 aa9.88□□□□□ -0.83
TPM4-202ENST00000344824 MUC21A0A0G2JKD1 596 aa9.87□□□□□ -0.83
TPM4-202ENST00000344824 MUC21A0A140T8X8 626 aa9.87□□□□□ -0.83
TPM4-202ENST00000344824 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
TPM4-202ENST00000344824 SPINK4O60575 86 aa9.87□□□□□ -0.83
TPM4-202ENST00000344824 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
TPM4-202ENST00000344824 GTSF1Q8WW33 167 aa9.87□□□□□ -0.83
TPM4-202ENST00000344824 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
TPM4-202ENST00000344824 TRGV11A0A075B6L2 103 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 TRAV10A0A0B4J240 114 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 IGLL5B9A064 214 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 J3QL48 77 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 AZU1P20160 251 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 S100PP25815 95 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 KCNIP4Q6PIL6 250 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 ZNF575Q86XF7 245 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 FER1L6-AS1Q8NA97 138 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 MDFICQ9P1T7 246 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
TPM4-202ENST00000344824 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 TDRG1Q3Y452 100 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 FAM222AQ5U5X8 452 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 LYZL1Q6UWQ5 148 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
TPM4-202ENST00000344824 ARMS2P0C7Q2 107 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 HTN3P15516 51 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 GFRA4Q9GZZ7 299 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 NAT8BQ9UHF3 227 aa9.84□□□□□ -0.83
TPM4-202ENST00000344824 DEFB131BA0A096LNP1 70 aa9.83□□□□□ -0.84
TPM4-202ENST00000344824 CXCL1P09341 107 aa9.83□□□□□ -0.84
TPM4-202ENST00000344824 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
TPM4-202ENST00000344824 RNASE3P12724 160 aaKnown RBP9.83□□□□□ -0.84
TPM4-202ENST00000344824 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
TPM4-202ENST00000344824 MRPL54Q6P161 138 aaKnown RBP9.83□□□□□ -0.84
TPM4-202ENST00000344824 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
TPM4-202ENST00000344824 GSN-AS1Q9NRJ2 163 aa9.83□□□□□ -0.84
TPM4-202ENST00000344824 TEX48A0A1B0GUV7 120 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 OR10AG1Q8NH19 301 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 BORCS7Q96B45 105 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 IMMP2LQ96T52 175 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 DKK2Q9UBU2 259 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 PHLDA3Q9Y5J5 127 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 MUC4Q99102 2169 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 IGHV4-4A0A075B6R2 117 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 M0R381 172 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
TPM4-202ENST00000344824 DAD1P61803 113 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 ELOBQ15370 118 aa9.82□□□□□ -0.84
TPM4-202ENST00000344824 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.82□□□□□ -0.84
TPM4-202ENST00000344824 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
TPM4-202ENST00000344824 FAM231BA6NCW3 169 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 SNURFLB1AK76 121 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 SNAI2O43623 268 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 CTRLP40313 264 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 DNLZQ5SXM8 178 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 SPANXN1Q5VSR9 72 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 RNASE8Q8TDE3 154 aaKnown RBP9.81□□□□□ -0.84
TPM4-202ENST00000344824 C16orf74Q96GX8 76 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 BTF3L4Q96K17 158 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 C9orf85Q96MD7 179 aa9.81□□□□□ -0.84
TPM4-202ENST00000344824 F2Z2F3 143 aa9.8□□□□□ -0.84
TPM4-202ENST00000344824 OR5AL1P0C617 328 aa9.8□□□□□ -0.84
TPM4-202ENST00000344824 MED14OSP0DP75 135 aa9.8□□□□□ -0.84
TPM4-202ENST00000344824 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
TPM4-202ENST00000344824 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 DEFB130BP0DP73 79 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 DEFB130AP0DP74 79 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 CAMPP49913 170 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 RIGQ13278 110 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 TWIST1Q15672 202 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 SSBP4Q9BWG4 385 aaPredicted RBP9.79□□□□□ -0.84
TPM4-202ENST00000344824 NOP10Q9NPE3 64 aaKnown RBP9.79□□□□□ -0.84
TPM4-202ENST00000344824 SCRT2Q9NQ03 307 aa9.79□□□□□ -0.84
TPM4-202ENST00000344824 MRPL16Q9NX20 251 aaKnown RBP9.79□□□□□ -0.84
TPM4-202ENST00000344824 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms