RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 COX11Q9Y6N1 276 aa13.26□□□□□ -0.29
KCNQ2-201ENST00000344425 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
KCNQ2-201ENST00000344425 TCRAP04437 139 aa13.25□□□□□ -0.29
KCNQ2-201ENST00000344425 SMUG1Q53HV7 270 aa13.25□□□□□ -0.29
KCNQ2-201ENST00000344425 WFDC1Q9HC57 220 aa13.25□□□□□ -0.29
KCNQ2-201ENST00000344425 PSG8Q9UQ74 426 aa13.25□□□□□ -0.29
KCNQ2-201ENST00000344425 GGTLC3B5MD39 225 aa13.24□□□□□ -0.29
KCNQ2-201ENST00000344425 SSNA1O43805 119 aa13.24□□□□□ -0.29
KCNQ2-201ENST00000344425 UPK1BO75841 260 aa13.24□□□□□ -0.29
KCNQ2-201ENST00000344425 ARL14EPLP0DKL9 152 aa13.24□□□□□ -0.29
KCNQ2-201ENST00000344425 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
KCNQ2-201ENST00000344425 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.23□□□□□ -0.29
KCNQ2-201ENST00000344425 LECT2O14960 151 aa13.23□□□□□ -0.29
KCNQ2-201ENST00000344425 RNASE3P12724 160 aaKnown RBP13.23□□□□□ -0.29
KCNQ2-201ENST00000344425 CDC34P49427 236 aaPredicted RBP13.23□□□□□ -0.29
KCNQ2-201ENST00000344425 TMEM75Q8N9X5 138 aa13.23□□□□□ -0.29
KCNQ2-201ENST00000344425 A0A087WWC5 75 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 GAGE12JA6NER3 117 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 A8MWV9 139 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 STAG3L2P0CL84 134 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 STAG3L3P0CL85 134 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 FLI1Q01543 452 aaPredicted RBP13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 GAGE1Q13065 139 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 GAGE4Q13068 117 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 GAGE5Q13069 117 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 GAGE13Q4V321 117 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 Q8N3U1 123 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 RMI2Q96E14 147 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 S100A4P26447 101 aaKnown RBP13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 PIK3CD-AS1Q5SR53 167 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 PRNTQ86SH4 94 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 MARVELD1Q9BSK0 173 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 PARLQ9H300 379 aa13.22□□□□□ -0.29
KCNQ2-201ENST00000344425 FGF8P55075 233 aaPredicted RBP13.21□□□□□ -0.3
KCNQ2-201ENST00000344425 SUMO1P63165 101 aaKnown RBP13.21□□□□□ -0.3
KCNQ2-201ENST00000344425 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.3
KCNQ2-201ENST00000344425 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.3
KCNQ2-201ENST00000344425 EPDR1Q9UM22 224 aa13.21□□□□□ -0.3
KCNQ2-201ENST00000344425 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 GCHFRP30047 84 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 Q8N976 141 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 OR2T35Q8NGX2 323 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 URGCP-MRPS24S4R325 110 aa13.2□□□□□ -0.3
KCNQ2-201ENST00000344425 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
KCNQ2-201ENST00000344425 RAB24Q969Q5 203 aa13.19□□□□□ -0.3
KCNQ2-201ENST00000344425 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
KCNQ2-201ENST00000344425 SCXQ7RTU7 201 aa13.18□□□□□ -0.3
KCNQ2-201ENST00000344425 OR2G3Q8NGZ4 309 aa13.18□□□□□ -0.3
KCNQ2-201ENST00000344425 MBP02144 154 aa13.17□□□□□ -0.3
KCNQ2-201ENST00000344425 ASIPP42127 132 aa13.17□□□□□ -0.3
KCNQ2-201ENST00000344425 IFITM3Q01628 133 aa13.17□□□□□ -0.3
KCNQ2-201ENST00000344425 SERTAD4-AS1Q5TG53 156 aa13.17□□□□□ -0.3
KCNQ2-201ENST00000344425 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
KCNQ2-201ENST00000344425 IGKV3D-20A0A0C4DH25 116 aa13.16□□□□□ -0.3
KCNQ2-201ENST00000344425 FABP5P3A8MUU1 101 aa13.16□□□□□ -0.3
KCNQ2-201ENST00000344425 CXorf1O96002 111 aa13.16□□□□□ -0.3
KCNQ2-201ENST00000344425 LINC01620Q4KN68 170 aa13.16□□□□□ -0.3
KCNQ2-201ENST00000344425 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
KCNQ2-201ENST00000344425 IGKV2D-24A0A075B6R9 120 aa13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 SYT8Q8NBV8 401 aa13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 CHAC1Q9BUX1 264 aa13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 SAMD10Q9BYL1 202 aa13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 IL36BQ9NZH7 164 aa13.15□□□□□ -0.3
KCNQ2-201ENST00000344425 RHODO00212 210 aa13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 SERF2P84101 59 aa13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 NIT1Q86X76 327 aa13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 C14orf178Q8N769 122 aaPredicted RBP13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 JPT2Q9H910 190 aa13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 Q9UF83 564 aa13.14□□□□□ -0.31
KCNQ2-201ENST00000344425 DEFA1P59665 94 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 DEFA3P59666 94 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 ELOBQ15370 118 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 ACTR3CQ9C0K3 210 aaPredicted RBP13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 CHCHD7Q9BUK0 85 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 KLK12Q9UKR0 248 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
KCNQ2-201ENST00000344425 A0A087WX48 190 aa13.12□□□□□ -0.31
KCNQ2-201ENST00000344425 B4DEV8 164 aa13.12□□□□□ -0.31
KCNQ2-201ENST00000344425 DMRTA1Q5VZB9 504 aa13.12□□□□□ -0.31
KCNQ2-201ENST00000344425 TRAV34A0A0B4J273 112 aa13.11□□□□□ -0.31
KCNQ2-201ENST00000344425 H3BVH4 76 aa13.11□□□□□ -0.31
KCNQ2-201ENST00000344425 OXTP01178 125 aa13.11□□□□□ -0.31
KCNQ2-201ENST00000344425 UBE2WQ96B02 151 aa13.11□□□□□ -0.31
KCNQ2-201ENST00000344425 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
KCNQ2-201ENST00000344425 IFNA7P01567 189 aa13.1□□□□□ -0.31
KCNQ2-201ENST00000344425 DNLZQ5SXM8 178 aa13.1□□□□□ -0.31
KCNQ2-201ENST00000344425 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms