RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 MUSTN1Q8IVN3 82 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 OOSP1A8MZH6 123 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 NXPH4O95158 308 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 INSL3P51460 131 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 TRAV8-3A0A0A6YYJ7 113 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 ARL14EPLP0DKL9 152 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 SPANXN1Q5VSR9 72 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 C20orf204Q6ZNR8 217 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 DAND5Q8N907 189 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 VPREB3Q9UKI3 123 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 SERP1Q9Y6X1 66 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 SCXQ7RTU7 201 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 Q6ZUT4 128 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 USP24Q9UPU5 2620 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 CCL3P10147 92 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 HOXB4P17483 251 aaPredicted RBP2.83□□□□□ -1.96
SYNE1-201ENST00000341594 EPOPA6NHQ4 379 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 MT-ATP8P03928 68 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 EGR2P11161 476 aaPredicted RBP2.83□□□□□ -1.96
SYNE1-201ENST00000341594 COX6A1P12074 109 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 ITPR3Q14573 2671 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 PRSS46E5RG02 174 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 KRTAP27-1Q3LI81 207 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 FAM57AQ8TBR7 257 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 GCHFRP30047 84 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 POM121L12Q8N7R1 296 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 GDF5OSQ5U4N7 250 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 C10orf113Q5VZT2 155 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 MAPKAPK5-AS1Q8N8E1 139 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 C20orf78Q9BR46 151 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 SIT1Q9Y3P8 196 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 IGHV1OR21-1A0A087WYE8 117 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 A0A1W2PR77 199 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 COL4A5P29400 1685 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 TCF19Q9Y242 345 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 IGHV1-69DA0A0B4J2H0 117 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 J3QLI3 93 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 VCYO14598 125 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 VN1R4Q7Z5H5 301 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 VSIG2Q96IQ7 327 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 RPP21Q9H633 154 aaKnown RBP2.83□□□□□ -1.96
SYNE1-201ENST00000341594 J3QT63 122 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 NPYP01303 97 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 GATA4P43694 442 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 ZFHX2Q9C0A1 2572 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-201ENST00000341594 H3BT86 120 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 ATP5EP2Q5VTU8 51 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 PNRC2Q9NPJ4 139 aaKnown RBP2.82□□□□□ -1.96
SYNE1-201ENST00000341594 HIST2H2BCQ6DN03 193 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 HBDP02042 147 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 FOXC1Q12948 553 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 MBD6Q96DN6 1003 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 UBE2AP49459 152 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 LINC01587Q99440 93 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 TPSG1Q9NRR2 321 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 WDR86Q86TI4 376 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 LINC00526Q96FQ7 95 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 CTSZQ9UBR2 303 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 TIMM17BO60830 172 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 DIAPH2-AS1Q14236 149 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 JPT2Q9H910 190 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 CCDC179H3BU77 68 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 NKAPP1Q8N9T2 125 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 K7EM74 188 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 A0A1B0GXF2 115 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 PFN2P35080 140 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 SRXN1Q9BYN0 137 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 CHCHD2Q9Y6H1 151 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-201ENST00000341594 V9GYV3 84 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 FAM74A4Q5TZK3 123 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 C17orf82Q86X59 251 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-201ENST00000341594 FLNCQ14315 2725 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 HIGD1CA8MV81 97 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 MUC6Q6W4X9 2439 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 DEFB4AO15263 64 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 P0DMU3 169 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 FAM231AP0DMU4 169 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 FAM231CP0DMU5 169 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 FAM222AQ5U5X8 452 aa2.82□□□□□ -1.96
SYNE1-201ENST00000341594 PIP4P1Q86T03 277 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 TMEM78Q5T7P6 136 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 MRPL53Q96EL3 112 aaKnown RBP2.81□□□□□ -1.96
SYNE1-201ENST00000341594 PAX9P55771 341 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 CECR9P0C854 216 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 IGF2RP11717 2491 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 IGKV1D-42A0A075B6H8 117 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 A0A0B4J2C4 111 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 MSRB1Q9NZV6 116 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 PRO1854Q9UHT4 67 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 DUSP14O95147 198 aaKnown RBP2.81□□□□□ -1.96
SYNE1-201ENST00000341594 FAM27E3Q08E93 113 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 ZNF747Q9BV97 191 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 CLEC19AQ6UXS0 136 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 TRAV40A0A0B4J280 105 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 C2orf70A6NJV1 201 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 SCRT2Q9NQ03 307 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms