RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ANKHD1Q8IWZ3 2542 aaKnown RBP9.16□□□□□ -0.94
RTN3-203ENST00000341307 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.94
RTN3-203ENST00000341307 EFNA4P52798 201 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 FBXL19-AS1Q494R0 122 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 MRPL36Q9P0J6 103 aaKnown RBP9.15□□□□□ -0.94
RTN3-203ENST00000341307 TRBV7-7A0A0K0K1E9 115 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 ORM2P19652 201 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 LOXP28300 417 aaPredicted RBP9.15□□□□□ -0.94
RTN3-203ENST00000341307 POM121L12Q8N7R1 296 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 ITLN2Q8WWU7 325 aaPredicted RBP9.15□□□□□ -0.94
RTN3-203ENST00000341307 LINC00574Q9H8X3 128 aa9.15□□□□□ -0.94
RTN3-203ENST00000341307 RBAKDNA6NC62 111 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 C19orf84I3L1E1 186 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 RPL13AP40429 203 aaKnown RBP9.14□□□□□ -0.95
RTN3-203ENST00000341307 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 RPS28P62857 69 aaKnown RBP9.14□□□□□ -0.95
RTN3-203ENST00000341307 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
RTN3-203ENST00000341307 EXOC3-AS1Q8N2X6 119 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 KIR2DL5BQ8NHK3 375 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 RNF185Q96GF1 192 aa9.14□□□□□ -0.95
RTN3-203ENST00000341307 MRPL20Q9BYC9 149 aaKnown RBP9.14□□□□□ -0.95
RTN3-203ENST00000341307 LGALS9O00182 355 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 UPK2O00526 184 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 MRPS12O15235 138 aaKnown RBP9.13□□□□□ -0.95
RTN3-203ENST00000341307 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 CFC1P0CG37 223 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 PLNP26678 52 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 VPS13CQ709C8 3753 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 EMP1P54849 157 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 TIMD4Q96H15 378 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 SVEP1Q4LDE5 3571 aa9.13□□□□□ -0.95
RTN3-203ENST00000341307 EBI3Q14213 229 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 TMEM219Q86XT9 240 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 THAP8Q8NA92 274 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 LINC00526Q96FQ7 95 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 DUX5Q96PT3 197 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
RTN3-203ENST00000341307 ZNF56Q15929 161 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 RUSC1-AS1Q66K80 236 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 SLC25A39Q9BZJ4 359 aaPredicted RBP9.12□□□□□ -0.95
RTN3-203ENST00000341307 ITPR2Q14571 2701 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 ABCA12Q86UK0 2595 aa9.12□□□□□ -0.95
RTN3-203ENST00000341307 IGLV2-18A0A075B6J9 118 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 TRGV11A0A075B6L2 103 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 UQCRQO14949 82 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 GATA1P15976 413 aaPredicted RBP9.11□□□□□ -0.95
RTN3-203ENST00000341307 ZNF833PQ6ZTB9 187 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 C8orf49Q96NF6 230 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 KAAG1Q9UBP8 84 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 POLQO75417 2590 aa9.11□□□□□ -0.95
RTN3-203ENST00000341307 A0A1W2PPR1 153 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 ZNF815PA8K554 130 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 E7EUB6 86 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 DLX6P56179 175 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 NAV3Q8IVL0 2385 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 F8VRH5 84 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 COX6B1P14854 86 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 AKAP6Q13023 2319 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 C4orf26Q17RF5 130 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 TMEM75Q8N9X5 138 aa9.1□□□□□ -0.95
RTN3-203ENST00000341307 IGHV3-72A0A0B4J1Y9 119 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 ELANEP08246 267 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 SAA1P0DJI8 122 aaPredicted RBP9.09□□□□□ -0.95
RTN3-203ENST00000341307 IGHV1-8P0DP01 117 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 ZNRF2Q8NHG8 242 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 MYOZ3Q8TDC0 251 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 PMVKQ15126 192 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 Q8N8P6 123 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
RTN3-203ENST00000341307 INS-IGF2F8WCM5 200 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 H3BMM0 161 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 H7C1H1 209 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 OXTP01178 125 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 LINC01620Q4KN68 170 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 IGFBPL1Q8WX77 278 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 UBE2WQ96B02 151 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 PRO1854Q9UHT4 67 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 UNC79Q9P2D8 2635 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 APCP25054 2843 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 MALRD1Q5VYJ5 2156 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 F8WDY8 70 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
RTN3-203ENST00000341307 HLA-DMBP28068 263 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 TMEM30BQ3MIR4 351 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 MRAPQ8TCY5 172 aa9.08□□□□□ -0.96
RTN3-203ENST00000341307 SPG11Q96JI7 2443 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 IGHV3-30P01768 117 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 IGHV3-30-5P0DP03 117 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms