RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 IL36BQ9NZH7 164 aa13.36□□□□□ -0.27
SYNE4-202ENST00000340477 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
SYNE4-202ENST00000340477 DNAH6Q9C0G6 4158 aa13.35□□□□□ -0.27
SYNE4-202ENST00000340477 TMSB15BA0A087X1C1 80 aa13.35□□□□□ -0.27
SYNE4-202ENST00000340477 MRPL23Q16540 153 aaKnown RBP13.35□□□□□ -0.27
SYNE4-202ENST00000340477 ZNF506Q5JVG8 444 aa13.35□□□□□ -0.27
SYNE4-202ENST00000340477 MED9Q9NWA0 146 aa13.35□□□□□ -0.27
SYNE4-202ENST00000340477 IGLV2-18A0A075B6J9 118 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 A0A096LPF7 62 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 GNG4P50150 75 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 PIK3CD-AS1Q5SR53 167 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 MLST8Q9BVC4 326 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 BOLA1Q9Y3E2 137 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 LINC00588Q9Y4M8 146 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 PHLDA3Q9Y5J5 127 aa13.34□□□□□ -0.27
SYNE4-202ENST00000340477 GRIFINA4D1Z8 144 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 PGPEP1LA6NFU8 196 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 A8MWV9 139 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 M0R2N4 97 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 RS1O15537 224 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 MGST1P10620 155 aaKnown RBP13.33□□□□□ -0.28
SYNE4-202ENST00000340477 SRIP30626 198 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 SMIM12Q96EX1 92 aa13.33□□□□□ -0.28
SYNE4-202ENST00000340477 ARMS2P0C7Q2 107 aa13.32□□□□□ -0.28
SYNE4-202ENST00000340477 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
SYNE4-202ENST00000340477 DAZAP1Q96EP5 407 aaKnown RBP13.32□□□□□ -0.28
SYNE4-202ENST00000340477 BIN3Q9NQY0 253 aa13.32□□□□□ -0.28
SYNE4-202ENST00000340477 GYPEP15421 78 aa13.31□□□□□ -0.28
SYNE4-202ENST00000340477 PRADC1Q9BSG0 188 aa13.31□□□□□ -0.28
SYNE4-202ENST00000340477 MRPS16Q9Y3D3 137 aaKnown RBP13.31□□□□□ -0.28
SYNE4-202ENST00000340477 RBFOX3A6NFN3 312 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 CXCL1P09341 107 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 GATA1P15976 413 aaPredicted RBP13.3□□□□□ -0.28
SYNE4-202ENST00000340477 ESRGQ1W209 222 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 SOHLH1Q5JUK2 328 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 NEGR1Q7Z3B1 354 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 SH2D6Q7Z4S9 175 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 ZNRF2Q8NHG8 242 aa13.3□□□□□ -0.28
SYNE4-202ENST00000340477 K7EQD1 137 aa13.29□□□□□ -0.28
SYNE4-202ENST00000340477 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
SYNE4-202ENST00000340477 RHOHQ15669 191 aa13.29□□□□□ -0.28
SYNE4-202ENST00000340477 UPK3BQ9BT76 320 aa13.29□□□□□ -0.28
SYNE4-202ENST00000340477 IGHV3-73A0A0B4J1V6 119 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 RAB19A4D1S5 217 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 M0R381 172 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 RHODO00212 210 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 TTC32Q5I0X7 151 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 ZFP2Q6ZN57 461 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 LYPD6BQ8NI32 183 aa13.28□□□□□ -0.28
SYNE4-202ENST00000340477 TRBV6-4A0A1B0GX49 114 aa13.27□□□□□ -0.29
SYNE4-202ENST00000340477 TMEM250H0YL14 139 aa13.27□□□□□ -0.29
SYNE4-202ENST00000340477 RPS20P60866 119 aaKnown RBP13.27□□□□□ -0.29
SYNE4-202ENST00000340477 RPL19P84098 196 aaKnown RBP13.27□□□□□ -0.29
SYNE4-202ENST00000340477 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.29
SYNE4-202ENST00000340477 PARLQ9H300 379 aa13.27□□□□□ -0.29
SYNE4-202ENST00000340477 Q9H8V8 135 aa13.27□□□□□ -0.29
SYNE4-202ENST00000340477 NBDYA0A0U1RRE5 68 aa13.26□□□□□ -0.29
SYNE4-202ENST00000340477 XKRY2A2RUG3 117 aa13.26□□□□□ -0.29
SYNE4-202ENST00000340477 TOR2AQ5JU69 321 aa13.26□□□□□ -0.29
SYNE4-202ENST00000340477 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
SYNE4-202ENST00000340477 Q6ZR54 194 aa13.26□□□□□ -0.29
SYNE4-202ENST00000340477 SCRT2Q9NQ03 307 aa13.26□□□□□ -0.29
SYNE4-202ENST00000340477 P01737 135 aa13.25□□□□□ -0.29
SYNE4-202ENST00000340477 FAM74A4Q5TZK3 123 aa13.25□□□□□ -0.29
SYNE4-202ENST00000340477 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
SYNE4-202ENST00000340477 SLC25A29Q8N8R3 303 aa13.25□□□□□ -0.29
SYNE4-202ENST00000340477 IGLV2-8P01709 118 aa13.24□□□□□ -0.29
SYNE4-202ENST00000340477 CEBPGP53567 150 aa13.24□□□□□ -0.29
SYNE4-202ENST00000340477 C1orf134Q5TEV5 83 aa13.24□□□□□ -0.29
SYNE4-202ENST00000340477 OR2D3Q8NGH3 330 aa13.24□□□□□ -0.29
SYNE4-202ENST00000340477 NXPH4O95158 308 aa13.23□□□□□ -0.29
SYNE4-202ENST00000340477 SPANXN1Q5VSR9 72 aa13.23□□□□□ -0.29
SYNE4-202ENST00000340477 LYPD5Q6UWN5 251 aa13.23□□□□□ -0.29
SYNE4-202ENST00000340477 SFRP2Q96HF1 295 aa13.23□□□□□ -0.29
SYNE4-202ENST00000340477 TRBV20OR9-2A0A075B6H5 130 aa13.22□□□□□ -0.29
SYNE4-202ENST00000340477 LOC100131303A0A0U1RQF7 123 aa13.22□□□□□ -0.29
SYNE4-202ENST00000340477 SIVA1O15304 175 aa13.22□□□□□ -0.29
SYNE4-202ENST00000340477 OR5AL1P0C617 328 aa13.22□□□□□ -0.29
SYNE4-202ENST00000340477 TEX261Q6UWH6 196 aa13.22□□□□□ -0.29
SYNE4-202ENST00000340477 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
SYNE4-202ENST00000340477 A0A1W2PPQ1 181 aa13.21□□□□□ -0.29
SYNE4-202ENST00000340477 SNAI2O43623 268 aa13.21□□□□□ -0.29
SYNE4-202ENST00000340477 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.29
SYNE4-202ENST00000340477 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
SYNE4-202ENST00000340477 TPPP3Q9BW30 176 aa13.21□□□□□ -0.29
SYNE4-202ENST00000340477 JPT2Q9H910 190 aa13.21□□□□□ -0.29
SYNE4-202ENST00000340477 A0A087WWL8 130 aa13.2□□□□□ -0.3
SYNE4-202ENST00000340477 C19orf71A6NCJ1 209 aa13.2□□□□□ -0.3
SYNE4-202ENST00000340477 ZNF575Q86XF7 245 aa13.2□□□□□ -0.3
SYNE4-202ENST00000340477 FER1L6-AS1Q8NA97 138 aa13.2□□□□□ -0.3
SYNE4-202ENST00000340477 SSBP4Q9BWG4 385 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-202ENST00000340477 SAMD10Q9BYL1 202 aa13.2□□□□□ -0.3
SYNE4-202ENST00000340477 SMIM17P0DL12 118 aa13.19□□□□□ -0.3
SYNE4-202ENST00000340477 C6orf223Q8N319 242 aa13.19□□□□□ -0.3
SYNE4-202ENST00000340477 TIRAPP58753 221 aa13.18□□□□□ -0.3
SYNE4-202ENST00000340477 UFSP1Q6NVU6 142 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms