RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 XKRY2A2RUG3 117 aa10□□□□□ -0.81
APOBEC3B-202ENST00000335760 F8W036 122 aa10□□□□□ -0.81
APOBEC3B-202ENST00000335760 MUC7Q8TAX7 377 aa10□□□□□ -0.81
APOBEC3B-202ENST00000335760 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 PHLDA1Q8WV24 401 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 RASL10AQ92737 203 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 OSTCQ9NRP0 149 aa9.99□□□□□ -0.81
APOBEC3B-202ENST00000335760 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 HTN3P15516 51 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 ZFAND6Q6FIF0 208 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 OR10G8Q8NGN5 311 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 PTH2Q96A98 100 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 TPPP3Q9BW30 176 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 PHLDA3Q9Y5J5 127 aa9.98□□□□□ -0.81
APOBEC3B-202ENST00000335760 MUC4Q99102 2169 aa9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 DEFB131BA0A096LNP1 70 aa9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
APOBEC3B-202ENST00000335760 MUC21A0A0G2JKD1 596 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 MUC21A0A140T8X8 626 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 A8MWL6 223 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 M0R381 172 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 SNAI2O43623 268 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 IGHV3-53P01767 116 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 ATP5G1P05496 136 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 OR5AL1P0C617 328 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 IGLC6P0CF74 106 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 CT83Q5H943 113 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 DMRTA1Q5VZB9 504 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 ZFP82Q8N141 532 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 C18orf15Q96N68 181 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 V9GYV3 84 aa9.96□□□□□ -0.82
APOBEC3B-202ENST00000335760 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
APOBEC3B-202ENST00000335760 SSTP61278 116 aa9.95□□□□□ -0.82
APOBEC3B-202ENST00000335760 CEMP1Q6PRD7 247 aaPredicted RBP9.95□□□□□ -0.82
APOBEC3B-202ENST00000335760 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
APOBEC3B-202ENST00000335760 A0A1W2PPQ1 181 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 F5H768 121 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 RS1O15537 224 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 LYZL1Q6UWQ5 148 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 OR4C5Q8NGB2 326 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 TSKUQ8WUA8 353 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 GTSF1Q8WW33 167 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 NDUFAF3Q9BU61 184 aa9.94□□□□□ -0.82
APOBEC3B-202ENST00000335760 TRAV4A0A0B4J268 109 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 F2Z2F3 143 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 C3orf84H3BNL1 204 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 HOXA5P20719 270 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 C10orf91Q5T1B1 145 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
APOBEC3B-202ENST00000335760 A8MWV9 139 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 NXPH4O95158 308 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 CTRLP40313 264 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 CACNG7P62955 275 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 RNF212Q495C1 297 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 CFAP126Q5VTH2 177 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 ZNF479Q96JC4 524 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 PGLYRP4Q96LB8 373 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 JPT2Q9H910 190 aa9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 KLK5Q9Y337 293 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3B-202ENST00000335760 TRGV4A0A0C4DH28 118 aa9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 IGLL5B9A064 214 aa9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 MT-ND4LP03901 98 aa9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 NDUFA5Q16718 116 aa9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 CARHSP1Q9Y2V2 147 aaKnown RBP9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 DYNC2H1Q8NCM8 4307 aaKnown RBP9.91□□□□□ -0.82
APOBEC3B-202ENST00000335760 IGHV3-73A0A0B4J1V6 119 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 FAM231BA6NCW3 169 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 FHL2Q14192 279 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 PLECQ15149 4684 aaKnown RBP9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 CASC10Q5T4H9 136 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 WDR73Q6P4I2 378 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 SAMD10Q9BYL1 202 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 MSRB1Q9NZV6 116 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
APOBEC3B-202ENST00000335760 IGHV4-4A0A075B6R2 117 aa9.89□□□□□ -0.83
APOBEC3B-202ENST00000335760 HIGD1CA8MV81 97 aa9.89□□□□□ -0.83
APOBEC3B-202ENST00000335760 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
APOBEC3B-202ENST00000335760 ANAPC16Q96DE5 110 aa9.89□□□□□ -0.83
APOBEC3B-202ENST00000335760 NACAE9PAV3 2078 aa9.89□□□□□ -0.83
APOBEC3B-202ENST00000335760 A0A087WWL8 130 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 A0A0J9YY99 117 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 SMIM27A0A1W2PRY6 76 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 CIDEAO60543 219 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms