RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TOMM6Q96B49 74 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 RMI2Q96E14 147 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 UPK3BQ9BT76 320 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 IGKV2D-24A0A075B6R9 120 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 Q9HAA7 133 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 YLPM1P49750 1951 aaKnown RBP7.67□□□□□ -1.18
COL4A6-201ENST00000334504 LOXP28300 417 aaPredicted RBP7.67□□□□□ -1.18
COL4A6-201ENST00000334504 C3orf22Q8N5N4 141 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 FANCMQ8IYD8 2048 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 IGHV1-69P01742 117 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 H3BQ85 93 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 NDUFA11Q86Y39 141 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 NDUFC2-KCTD14E9PQ53 114 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 FRMD6-AS1P0C7T7 363 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 IGLC6P0CF74 106 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 Q8N1Y9 231 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 C20orf197Q8N268 126 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 CEP250Q9BV73 2442 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
COL4A6-201ENST00000334504 ZNF503-AS2A6NEH8 195 aa7.65□□□□□ -1.18
COL4A6-201ENST00000334504 TET1Q8NFU7 2136 aa7.65□□□□□ -1.18
COL4A6-201ENST00000334504 ETV2O00321 342 aaPredicted RBP7.65□□□□□ -1.18
COL4A6-201ENST00000334504 GP9P14770 177 aa7.65□□□□□ -1.18
COL4A6-201ENST00000334504 SPANXB1Q9NS25 103 aaPredicted RBP7.65□□□□□ -1.18
COL4A6-201ENST00000334504 AKAP6Q13023 2319 aa7.65□□□□□ -1.18
COL4A6-201ENST00000334504 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
COL4A6-201ENST00000334504 ODF1Q14990 250 aa7.65□□□□□ -1.18
COL4A6-201ENST00000334504 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.19
COL4A6-201ENST00000334504 LYPD6Q86Y78 171 aa7.65□□□□□ -1.19
COL4A6-201ENST00000334504 RNF152Q8N8N0 203 aa7.65□□□□□ -1.19
COL4A6-201ENST00000334504 IGLV10-54A0A075B6I4 117 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 PIFOQ8TCI5 191 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 FAM110AQ9BQ89 295 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 KMT2EQ8IZD2 1858 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 MYLKQ15746 1914 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 WI2-2373I1.2A0A1W2PRP0 233 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 APOC4P55056 127 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 SEC61GP60059 68 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 C9orf47Q6ZRZ4 202 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 CAMK2N2Q96S95 79 aa7.64□□□□□ -1.19
COL4A6-201ENST00000334504 IGKV2D-26A0A0A0MRZ7 120 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 TEX49A0A1B0GTD5 131 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 C10orf105Q8TEF2 133 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 SBF1O95248 1867 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 K7EQD1 137 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 TMEM256-PLSCR3K7ERE1 68 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 MSMBP08118 114 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 C17orf82Q86X59 251 aaPredicted RBP7.63□□□□□ -1.19
COL4A6-201ENST00000334504 SCN10AQ9Y5Y9 1956 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 COL6A6A6NMZ7 2263 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 NFE4Q86UQ8 179 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 COX7A2LO14548 114 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 LENEPQ9Y5L5 61 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 IGLV3-9A0A075B6K5 115 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 RSPO1Q2MKA7 263 aaPredicted RBP7.63□□□□□ -1.19
COL4A6-201ENST00000334504 TIMM17AQ99595 171 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 CLUHP3Q96NS8 147 aa7.63□□□□□ -1.19
COL4A6-201ENST00000334504 C16orf54Q6UWD8 224 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 ACACAQ13085 2346 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 ZNF524Q96C55 264 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 PATE2Q6UY27 113 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 WFDC11Q8NEX6 87 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 LCTP09848 1927 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 DOPEY2Q9Y3R5 2298 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 NPBQ8NG41 125 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 CHD3Q12873 2000 aaKnown RBP7.62□□□□□ -1.19
COL4A6-201ENST00000334504 TIRAPP58753 221 aa7.62□□□□□ -1.19
COL4A6-201ENST00000334504 ZNF503Q96F45 646 aa7.61□□□□□ -1.19
COL4A6-201ENST00000334504 COL4A6Q14031 1691 aa7.61□□□□□ -1.19
COL4A6-201ENST00000334504 KIAA2026Q5HYC2 2103 aa7.61□□□□□ -1.19
COL4A6-201ENST00000334504 ANK1P16157 1881 aa7.61□□□□□ -1.19
COL4A6-201ENST00000334504 IGLV3-1P01715 115 aa7.61□□□□□ -1.19
COL4A6-201ENST00000334504 MIR7-3HGQ8N6C7 128 aa7.61□□□□□ -1.19
COL4A6-201ENST00000334504 C2orf70A6NJV1 201 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 RIF1Q5UIP0 2472 aaKnown RBP7.6□□□□□ -1.19
COL4A6-201ENST00000334504 SIPA1L1O43166 1804 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 DAZ2Q13117 558 aaKnown RBP7.6□□□□□ -1.19
COL4A6-201ENST00000334504 DAZ4Q86SG3 579 aaKnown RBP7.6□□□□□ -1.19
COL4A6-201ENST00000334504 DAZ3Q9NR90 486 aaKnown RBP7.6□□□□□ -1.19
COL4A6-201ENST00000334504 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 TP73-AS1Q9UF72 201 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 IGHV4OR15-8A0A075B7B6 117 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 A0A087WW49 117 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 MRPL36Q9P0J6 103 aaKnown RBP7.6□□□□□ -1.19
COL4A6-201ENST00000334504 HEATR5AQ86XA9 2040 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 GYPEP15421 78 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 LOXL1Q08397 574 aaPredicted RBP7.6□□□□□ -1.19
COL4A6-201ENST00000334504 C1orf195Q5TG92 126 aa7.6□□□□□ -1.19
COL4A6-201ENST00000334504 H0Y9J4 135 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 PHF3Q92576 2039 aaKnown RBP7.59□□□□□ -1.19
COL4A6-201ENST00000334504 IGHV3-30P01768 117 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 IGHV3-33P01772 117 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 IGHV3-30-3P0DP02 117 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 IGHV3-30-5P0DP03 117 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 ENHOQ6UWT2 76 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 I3L2K1 104 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms