RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 NDPQ00604 133 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 PRO0461Q9UI25 63 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 TRBV7-3A0A075B6L6 115 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 ZNF815PA8K554 130 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 LY6LH3BQJ8 138 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 FOXI1Q12951 378 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 DLX4Q92988 240 aaPredicted RBP10.57□□□□□ -0.72
SYNE3-201ENST00000334258 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 H3BVH4 76 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 SPRY2O43597 315 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 NRACQ8N912 160 aa10.57□□□□□ -0.72
SYNE3-201ENST00000334258 M0R381 172 aa10.56□□□□□ -0.72
SYNE3-201ENST00000334258 SRSF2Q01130 221 aaKnown RBP10.56□□□□□ -0.72
SYNE3-201ENST00000334258 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 TGFAP01135 160 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 MORN3Q6PF18 240 aaPredicted RBP10.55□□□□□ -0.72
SYNE3-201ENST00000334258 Q6ZQT7 251 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 PTH2Q96A98 100 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 ZANQ9Y493 2812 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 SMIM2Q9BVW6 85 aa10.55□□□□□ -0.72
SYNE3-201ENST00000334258 LGALS1P09382 135 aaKnown RBP10.54□□□□□ -0.72
SYNE3-201ENST00000334258 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
SYNE3-201ENST00000334258 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
SYNE3-201ENST00000334258 ECSCRQ19T08 205 aa10.54□□□□□ -0.72
SYNE3-201ENST00000334258 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
SYNE3-201ENST00000334258 NPBQ8NG41 125 aa10.54□□□□□ -0.72
SYNE3-201ENST00000334258 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
SYNE3-201ENST00000334258 MGPP08493 103 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 SLC25A16P16260 332 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 CD3EP07766 207 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 ZFAND6Q6FIF0 208 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 TEX29Q8N6K0 151 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 GAGE7O76087 117 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 KLRB1Q12918 225 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 GAGE4Q13068 117 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 KLHL30-AS1Q8NEE0 82 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 SPXQ9BT56 116 aa10.53□□□□□ -0.72
SYNE3-201ENST00000334258 SCGB1C2P0DMR2 95 aa10.52□□□□□ -0.72
SYNE3-201ENST00000334258 EMP1P54849 157 aa10.52□□□□□ -0.72
SYNE3-201ENST00000334258 CSPG4Q6UVK1 2322 aa10.52□□□□□ -0.72
SYNE3-201ENST00000334258 BUB3O43684 328 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
SYNE3-201ENST00000334258 ADORA2A-AS1P86434 159 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 NFE4Q86UQ8 179 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 CCDC168Q8NDH2 2452 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 CHD6Q8TD26 2715 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 C2orf66Q6UXQ4 117 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 CLEC19AQ6UXS0 136 aa10.52□□□□□ -0.73
SYNE3-201ENST00000334258 SMCPP49901 116 aaPredicted RBP10.51□□□□□ -0.73
SYNE3-201ENST00000334258 C14orf178Q8N769 122 aaPredicted RBP10.51□□□□□ -0.73
SYNE3-201ENST00000334258 PLEKHB2Q96CS7 222 aa10.51□□□□□ -0.73
SYNE3-201ENST00000334258 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
SYNE3-201ENST00000334258 ZNF672Q499Z4 452 aaPredicted RBP10.5□□□□□ -0.73
SYNE3-201ENST00000334258 A4D1N5 150 aa10.5□□□□□ -0.73
SYNE3-201ENST00000334258 RBAKDNA6NC62 111 aa10.5□□□□□ -0.73
SYNE3-201ENST00000334258 PRB1P04280 392 aa10.5□□□□□ -0.73
SYNE3-201ENST00000334258 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
SYNE3-201ENST00000334258 RAX2Q96IS3 184 aa10.5□□□□□ -0.73
SYNE3-201ENST00000334258 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
SYNE3-201ENST00000334258 OR11H6Q8NGC7 330 aa10.49□□□□□ -0.73
SYNE3-201ENST00000334258 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
SYNE3-201ENST00000334258 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
SYNE3-201ENST00000334258 GNLYP22749 145 aa10.48□□□□□ -0.73
SYNE3-201ENST00000334258 PPDPFLQ8WWR9 84 aa10.48□□□□□ -0.73
SYNE3-201ENST00000334258 BAALCQ8WXS3 180 aa10.48□□□□□ -0.73
SYNE3-201ENST00000334258 TOMM6Q96B49 74 aa10.48□□□□□ -0.73
SYNE3-201ENST00000334258 METTL26Q96S19 204 aa10.48□□□□□ -0.73
SYNE3-201ENST00000334258 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
SYNE3-201ENST00000334258 NOTCH2Q04721 2471 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 IGHV7-81A0A0B4J1V7 117 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 LINC01548A6NM66 108 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 A8MWV9 139 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 LINC01619G3V211 115 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 IGF1P05019 195 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 UCNP55089 124 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 VMO1Q7Z5L0 202 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 TIMD4Q96H15 378 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 PSMG3-AS1Q96PY0 264 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 RASL10AQ92737 203 aa10.47□□□□□ -0.73
SYNE3-201ENST00000334258 HERVK_113P61574 105 aa10.46□□□□□ -0.73
SYNE3-201ENST00000334258 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
SYNE3-201ENST00000334258 TEN1Q86WV5 123 aa10.46□□□□□ -0.73
SYNE3-201ENST00000334258 DOPEY1Q5JWR5 2465 aa10.46□□□□□ -0.73
SYNE3-201ENST00000334258 TRAV8-2A0A0B4J237 113 aa10.46□□□□□ -0.74
SYNE3-201ENST00000334258 A0A1W2PPR1 153 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms