RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SNAI2O43623 268 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 ATP5G1P05496 136 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
LRRC28-202ENST00000331450 CASC10Q5T4H9 136 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 ZFAND6Q6FIF0 208 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 CEMP1Q6PRD7 247 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-202ENST00000331450 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-202ENST00000331450 RPP21Q9H633 154 aaKnown RBP11.33□□□□□ -0.6
LRRC28-202ENST00000331450 DEFB131BA0A096LNP1 70 aa11.32□□□□□ -0.6
LRRC28-202ENST00000331450 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
LRRC28-202ENST00000331450 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
LRRC28-202ENST00000331450 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
LRRC28-202ENST00000331450 TRGV2A0A075B6R0 118 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 NXPH4O95158 308 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 GZMBP10144 247 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 ZNF876PQ49A33 203 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 POM121L12Q8N7R1 296 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 OSTCQ9NRP0 149 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 CSMD3Q7Z407 3707 aa11.31□□□□□ -0.6
LRRC28-202ENST00000331450 TMEM218A2RU14 115 aa11.3□□□□□ -0.6
LRRC28-202ENST00000331450 ADCYAP1P18509 176 aa11.3□□□□□ -0.6
LRRC28-202ENST00000331450 HOXA5P20719 270 aa11.3□□□□□ -0.6
LRRC28-202ENST00000331450 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
LRRC28-202ENST00000331450 ADIRFQ15847 76 aa11.3□□□□□ -0.6
LRRC28-202ENST00000331450 CT83Q5H943 113 aa11.3□□□□□ -0.6
LRRC28-202ENST00000331450 TRAV4A0A0B4J268 109 aa11.29□□□□□ -0.6
LRRC28-202ENST00000331450 XKRY2A2RUG3 117 aa11.29□□□□□ -0.6
LRRC28-202ENST00000331450 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
LRRC28-202ENST00000331450 HTN3P15516 51 aa11.29□□□□□ -0.6
LRRC28-202ENST00000331450 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
LRRC28-202ENST00000331450 SFRP2Q96HF1 295 aa11.29□□□□□ -0.6
LRRC28-202ENST00000331450 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
LRRC28-202ENST00000331450 CTRLP40313 264 aa11.28□□□□□ -0.6
LRRC28-202ENST00000331450 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
LRRC28-202ENST00000331450 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
LRRC28-202ENST00000331450 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
LRRC28-202ENST00000331450 V9GYV3 84 aa11.28□□□□□ -0.6
LRRC28-202ENST00000331450 RS1O15537 224 aa11.27□□□□□ -0.61
LRRC28-202ENST00000331450 PNRC1Q12796 327 aaPredicted RBP11.27□□□□□ -0.61
LRRC28-202ENST00000331450 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
LRRC28-202ENST00000331450 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
LRRC28-202ENST00000331450 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
LRRC28-202ENST00000331450 ZNF479Q96JC4 524 aa11.27□□□□□ -0.61
LRRC28-202ENST00000331450 KLK5Q9Y337 293 aaPredicted RBP11.27□□□□□ -0.61
LRRC28-202ENST00000331450 STARD9Q9P2P6 4700 aa11.27□□□□□ -0.61
LRRC28-202ENST00000331450 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 A8MWL6 223 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 F5H768 121 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 M0R381 172 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 FHL2Q14192 279 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 C15orf54Q8N8G6 183 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 SEC11CQ9BY50 192 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
LRRC28-202ENST00000331450 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 A8MWV9 139 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 F2Z2F3 143 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 OR4C5Q8NGB2 326 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 OR10G8Q8NGN5 311 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 JPT2Q9H910 190 aa11.25□□□□□ -0.61
LRRC28-202ENST00000331450 MUC21A0A0G2JKD1 596 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 MUC21A0A140T8X8 626 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 IGLL5B9A064 214 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 F8W036 122 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 CIDEAO60543 219 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-202ENST00000331450 TCTAP57738 103 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 C10orf91Q5T1B1 145 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 UFSP1Q6NVU6 142 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 LYZL1Q6UWQ5 148 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
LRRC28-202ENST00000331450 FAM231BA6NCW3 169 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 CACNG7P62955 275 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 SPANXN1Q5VSR9 72 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 SAMD10Q9BYL1 202 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
LRRC28-202ENST00000331450 TRAV26-1A0A087WT03 109 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 H3BNG1 76 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 CRYGDP07320 174 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
LRRC28-202ENST00000331450 CRYBA4P53673 196 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 WDR73Q6P4I2 378 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
LRRC28-202ENST00000331450 CARHSP1Q9Y2V2 147 aaKnown RBP11.22□□□□□ -0.61
LRRC28-202ENST00000331450 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
LRRC28-202ENST00000331450 RHODO00212 210 aa11.21□□□□□ -0.61
LRRC28-202ENST00000331450 SLAQ13239 276 aa11.21□□□□□ -0.61
LRRC28-202ENST00000331450 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
LRRC28-202ENST00000331450 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
LRRC28-202ENST00000331450 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
LRRC28-202ENST00000331450 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms