RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CREBBPQ92793 2442 aa13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 EDN2P20800 178 aa13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 S100A4P26447 101 aaKnown RBP13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 RNF183Q96D59 192 aa13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 C19orf84I3L1E1 186 aa13.18□□□□□ -0.3
PTP4A3-201ENST00000329397 TSSC4Q9Y5U2 329 aaPredicted RBP13.18□□□□□ -0.3
PTP4A3-201ENST00000329397 U3KQE9 123 aa13.18□□□□□ -0.3
PTP4A3-201ENST00000329397 GAGE12HA6NDE8 117 aa13.18□□□□□ -0.3
PTP4A3-201ENST00000329397 GNRH2O43555 120 aa13.18□□□□□ -0.3
PTP4A3-201ENST00000329397 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 SMIM2Q9BVW6 85 aa13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 FLNCQ14315 2725 aa13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 RNASE4P34096 147 aaKnown RBP13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 RPL24P83731 157 aaKnown RBP13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 ANXA2RQ3ZCQ2 193 aa13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 Q6ZS46 218 aa13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 CEND1Q8N111 149 aa13.17□□□□□ -0.3
PTP4A3-201ENST00000329397 A0A087WX48 190 aa13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 SRSF1Q07955 248 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 RASL10AQ92737 203 aa13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 B5MCH6 92 aa13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 PIFOQ8TCI5 191 aa13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 ZANQ9Y493 2812 aa13.16□□□□□ -0.3
PTP4A3-201ENST00000329397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.15□□□□□ -0.3
PTP4A3-201ENST00000329397 ITLN2Q8WWU7 325 aaPredicted RBP13.15□□□□□ -0.3
PTP4A3-201ENST00000329397 HIGD1BQ9P298 99 aa13.15□□□□□ -0.3
PTP4A3-201ENST00000329397 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
PTP4A3-201ENST00000329397 PHLDA3Q9Y5J5 127 aa13.15□□□□□ -0.3
PTP4A3-201ENST00000329397 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.31
PTP4A3-201ENST00000329397 SCGB3A1Q96QR1 104 aa13.15□□□□□ -0.31
PTP4A3-201ENST00000329397 CENPEQ02224 2701 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 EMP1P54849 157 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 SUMO2P61956 95 aaKnown RBP13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 MOB4Q9Y3A3 225 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 IGHV4-38-2P0DP08 117 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 C9orf139Q6ZV77 190 aa13.14□□□□□ -0.31
PTP4A3-201ENST00000329397 OR10J6PQ8NGY7 276 aa13.13□□□□□ -0.31
PTP4A3-201ENST00000329397 MRPL53Q96EL3 112 aaKnown RBP13.13□□□□□ -0.31
PTP4A3-201ENST00000329397 JPT2Q9H910 190 aa13.13□□□□□ -0.31
PTP4A3-201ENST00000329397 BLCAPP62952 87 aa13.13□□□□□ -0.31
PTP4A3-201ENST00000329397 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
PTP4A3-201ENST00000329397 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 POLQO75417 2590 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 GAGE5Q13069 117 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 GAGE6Q13070 117 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 OR5A1Q8NGJ0 315 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 IGHV4-4A0A075B6R2 117 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 KLK9Q2XQG4 91 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 KLK9Q9UKQ9 250 aa13.12□□□□□ -0.31
PTP4A3-201ENST00000329397 F8VRH5 84 aa13.11□□□□□ -0.31
PTP4A3-201ENST00000329397 TM2D2Q9BX73 214 aa13.11□□□□□ -0.31
PTP4A3-201ENST00000329397 CYSLTR1Q9Y271 337 aa13.11□□□□□ -0.31
PTP4A3-201ENST00000329397 ASIPP42127 132 aa13.11□□□□□ -0.31
PTP4A3-201ENST00000329397 TRAV21A0A0B4J279 112 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 H3BMG7 143 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 C19orf54Q5BKX5 351 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 IGHV4-61A0A0C4DH41 118 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 IGLL5B9A064 214 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 SOCS3O14543 225 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 WFDC2Q14508 124 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 C5orf47Q569G3 176 aa13.1□□□□□ -0.31
PTP4A3-201ENST00000329397 H3BUX3 64 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 H7C1H1 209 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 PLNP26678 52 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 MRPL16Q9NX20 251 aaKnown RBP13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 VPREB3Q9UKI3 123 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 PKD1L2Q7Z442 2459 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 IGHV1-69P01742 117 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 FAM223AQ8IWN6 122 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 BAALCQ8WXS3 180 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
PTP4A3-201ENST00000329397 USP9XQ93008 2570 aaPredicted RBP13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 A0A087WWL8 130 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 DUSP14O95147 198 aaKnown RBP13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 LINC00477Q96M19 166 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 ERG28Q9UKR5 140 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 TOMM6Q96B49 74 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 RHPN1-AS1Q9BWJ2 59 aa13.08□□□□□ -0.32
PTP4A3-201ENST00000329397 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 KLHL30-AS1Q8NEE0 82 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 E9PLD3 99 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms