RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 M0QZ24 198 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 CRLF1O75462 422 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 LINC01545Q5VT33 79 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 DLEU1O43261 78 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 C11orf72Q8NBR9 251 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 DUX5Q96PT3 197 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 SMR3AQ99954 134 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 ZNF747Q9BV97 191 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 GAS8-AS1O95177 125 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 RNASE4P34096 147 aaKnown RBP5.26□□□□□ -1.57
NPHP1-201ENST00000316534 CD300EQ496F6 205 aaPredicted RBP5.26□□□□□ -1.57
NPHP1-201ENST00000316534 PET117Q6UWS5 81 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 LINC00482Q8N8I6 264 aa5.26□□□□□ -1.57
NPHP1-201ENST00000316534 IGHV1OR15-1A0A075B7D0 117 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 TMSB15BA0A087X1C1 80 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 TNFRSF6BO95407 300 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 RASL10AQ92737 203 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 TMEM208Q9BTX3 173 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 PRO1933Q9H354 126 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 DPH3P1Q9H4G8 78 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 NXT2Q9NPJ8 142 aaKnown RBP5.25□□□□□ -1.57
NPHP1-201ENST00000316534 FAM208BQ5VWN6 2430 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 OR4C46A6NHA9 309 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 ZNF688P0C7X2 276 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 IFI27P40305 119 aaPredicted RBP5.25□□□□□ -1.57
NPHP1-201ENST00000316534 AMTP48728 403 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 CITED1Q99966 193 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 GNRH2O43555 120 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 GIG44P09565 113 aaPredicted RBP5.25□□□□□ -1.57
NPHP1-201ENST00000316534 PTTG1IPP53801 180 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 PMCHL1Q16048 86 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 ORAOV1Q8WV07 137 aa5.25□□□□□ -1.57
NPHP1-201ENST00000316534 SYS1-DBNDD2H3BUS1 97 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 H3BVH4 76 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 M0R143 59 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 M0R2Z0 102 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 CRYGDP07320 174 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 EVI2AP22794 236 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 FAM19A2Q8N3H0 131 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 CSNK1G2-AS1Q8NCQ2 148 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 TRGV11A0A075B6L2 103 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 PPP1R17O96001 155 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 FCER1GP30273 86 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 POLR2KP53803 58 aaKnown RBP5.24□□□□□ -1.57
NPHP1-201ENST00000316534 MORN3Q6PF18 240 aaPredicted RBP5.24□□□□□ -1.57
NPHP1-201ENST00000316534 AP5S1Q9NUS5 200 aa5.24□□□□□ -1.57
NPHP1-201ENST00000316534 ITPR2Q14571 2701 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 HSBP1O75506 76 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 LGALS9BQ3B8N2 356 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 LGALS9CQ6DKI2 356 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 Q8N1Y9 231 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 TMEM70Q9BUB7 260 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 SAMD10Q9BYL1 202 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 MAP1LC3AQ9H492 121 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 HSPB8Q9UJY1 196 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 CKS2P33552 79 aa5.23□□□□□ -1.57
NPHP1-201ENST00000316534 RNASEKQ6P5S7 137 aaKnown RBP5.23□□□□□ -1.57
NPHP1-201ENST00000316534 FAM159AQ6UWV7 190 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 LINC00173Q6ZV60 143 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 C2orf91Q6ZV80 131 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 AP1S3Q96PC3 154 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 PTPN13Q12923 2485 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 FLNAP21333 2647 aaKnown RBP5.22□□□□□ -1.57
NPHP1-201ENST00000316534 HBDP02042 147 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 RIPPLY3P57055 190 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 DEFB131AP59861 70 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 RPL11P62913 178 aaKnown RBP5.22□□□□□ -1.57
NPHP1-201ENST00000316534 LEPROTL1O95214 131 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 DUX3Q96PT4 197 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 NACAE9PAV3 2078 aa5.22□□□□□ -1.57
NPHP1-201ENST00000316534 HELZ2Q9BYK8 2649 aaKnown RBP5.22□□□□□ -1.57
NPHP1-201ENST00000316534 TRAV12-3A0A0B4J271 114 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 TRBV27A0A0K0K1C4 114 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 NPSP0C0P6 89 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 TOMM6Q96B49 74 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 SMIM2Q9BVW6 85 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 MDFICQ9P1T7 246 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 MED13LQ71F56 2210 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 POLQO75417 2590 aa5.21□□□□□ -1.57
NPHP1-201ENST00000316534 PLAC8L1A1L4L8 177 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 LINC01549A6NIU2 74 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 KNCNA6PVL3 124 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 SMKR1H3BMG3 65 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 M0QY20 66 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 TCAPO15273 167 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 INSL3P51460 131 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 C1orf158Q8N1D5 194 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 WFDC9Q8NEX5 89 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 ABCA1O95477 2261 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 TRAV9-2A0A087WT02 112 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 TRAV12-1A0A0B4J245 112 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 INAFM1C9JVW0 142 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 CD33P20138 364 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 RBX1P62877 108 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 SPINK13Q1W4C9 94 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 SPANXN1Q5VSR9 72 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 STPG4Q8N801 248 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 C18orf15Q96N68 181 aa5.21□□□□□ -1.58
NPHP1-201ENST00000316534 SPXQ9BT56 116 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms