RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CDSNQ15517 529 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 Q6ZS46 218 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 SLC25A29Q8N8R3 303 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 WFDC11Q8NEX6 87 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 CTSZQ9UBR2 303 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 INTS1Q8N201 2190 aaKnown RBP5.07□□□□□ -1.6
ZNF540-201ENST00000316433 TRBV19A0A075B6N1 114 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 TRBV30A0A0K0K1B3 111 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 LYZL6O75951 148 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 MED14OSP0DP75 135 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 NPC2P61916 151 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 PRR25Q96S07 402 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 BEX4Q9NWD9 120 aaPredicted RBP5.06□□□□□ -1.6
ZNF540-201ENST00000316433 PEMTQ9UBM1 199 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 SZT2Q5T011 3432 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 TRBV7-1A0A0A6YYK4 115 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 EPM2AB3EWF7 344 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 SDIM1Q6ZPB5 146 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 EEF1AKMT3Q96AZ1 226 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 FAM215AQ9Y5M1 114 aa5.06□□□□□ -1.6
ZNF540-201ENST00000316433 TRAV12-2A0A075B6T6 113 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 NDUFC2-KCTD14E9PQ53 114 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 TRIAP1O43715 76 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 C16orf92Q96LL3 132 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 LENEPQ9Y5L5 61 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 SPTBN5Q9NRC6 3674 aaKnown RBP5.05□□□□□ -1.6
ZNF540-201ENST00000316433 IGKV1-16P04430 117 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 LOXP28300 417 aaPredicted RBP5.05□□□□□ -1.6
ZNF540-201ENST00000316433 PLGLAQ15195 96 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 C16orf95Q9H693 158 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 PATE3B3GLJ2 98 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 ZNHIT1O43257 154 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 GATA1P15976 413 aaPredicted RBP5.05□□□□□ -1.6
ZNF540-201ENST00000316433 TMEM200BQ69YZ2 307 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 DCTN5Q9BTE1 182 aa5.05□□□□□ -1.6
ZNF540-201ENST00000316433 DSCAMO60469 2012 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 ODF3BA8MYP8 253 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 M0R1W7 72 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 SYNJ2BPP57105 145 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 FAM19A1Q7Z5A9 133 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 Q8N6K4 173 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 DEFB127Q9H1M4 99 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 FREM1Q5H8C1 2179 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.04□□□□□ -1.6
ZNF540-201ENST00000316433 SPRY2O43597 315 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 IGHV1-8P0DP01 117 aa5.04□□□□□ -1.6
ZNF540-201ENST00000316433 NDUFC2O95298 119 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 RPL27AP46776 148 aaKnown RBP5.03□□□□□ -1.6
ZNF540-201ENST00000316433 RHOHQ15669 191 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 ZNRF1Q8ND25 227 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 IGHV1-3A0A0C4DH29 117 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 TMEM223A0PJW6 202 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 SH2D1AO60880 128 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 APRG1Q8IVJ8 170 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 C8orf49Q96NF6 230 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 SCGB3A1Q96QR1 104 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 MSRB1Q9NZV6 116 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 FHL2Q14192 279 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 C14orf178Q8N769 122 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-201ENST00000316433 LINC00482Q8N8I6 264 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 C17orf77Q96MU5 243 aa5.03□□□□□ -1.6
ZNF540-201ENST00000316433 IGLV11-55A0A075B6I3 123 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 COX6CP09669 75 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 DYNLRB1Q9NP97 96 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 ICOSQ9Y6W8 199 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 K7EIM0 57 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 LST1O00453 97 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 TIRAPP58753 221 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 C9orf139Q6ZV77 190 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 ZNF575Q86XF7 245 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 DCANP1Q8TF63 244 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 RETNQ9HD89 108 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 EYSQ5T1H1 3165 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 COL6A3P12111 3177 aa5.02□□□□□ -1.61
ZNF540-201ENST00000316433 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 M0R381 172 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 NDUFB3O43676 98 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 IGKV1-17P01599 117 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 IGHV3-48P01763 117 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 KNL1Q8NG31 2342 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 TMEM89A2RUT3 159 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 BUB1B-PAK6H3BSN5 160 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 TSPEAR-AS2P59090 65 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 MINOS1Q5TGZ0 78 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 FDCSPQ8NFU4 85 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 CLEC2BQ92478 149 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 TOMM6Q96B49 74 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 TMEM243Q9BU79 118 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 TIMM21Q9BVV7 248 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 KLK15Q9H2R5 256 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 MRPL36Q9P0J6 103 aaKnown RBP5.01□□□□□ -1.61
ZNF540-201ENST00000316433 MINOS1-NBL1R4GNA1 71 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 VCANP13611 3396 aa5.01□□□□□ -1.61
ZNF540-201ENST00000316433 E7EUB6 86 aa5□□□□□ -1.61
ZNF540-201ENST00000316433 NXPH4O95158 308 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms