RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 ZNF493Q6ZR52 646 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 Q8N8P6 123 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 KLF12Q9Y4X4 402 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 HILS1P60008 231 aa8.26□□□□□ -1.09
SYNPO2-201ENST00000307142 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
SYNPO2-201ENST00000307142 SNHG12Q9BXW3 62 aa8.26□□□□□ -1.09
SYNPO2-201ENST00000307142 UTRNP46939 3433 aa8.26□□□□□ -1.09
SYNPO2-201ENST00000307142 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
SYNPO2-201ENST00000307142 CT83Q5H943 113 aa8.26□□□□□ -1.09
SYNPO2-201ENST00000307142 ZNF726P1Q15940 193 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 hDV102S1A0JD36 115 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 WIPF3A6NGB9 483 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 K7ERU9 68 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 CDSNQ15517 529 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 AMTNQ6UX39 209 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 UNQ9165/PRO28630Q6UXU0 137 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 PROP1O75360 226 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 Q6ZSV7 163 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 ZNF48Q96MX3 618 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 FAM110AQ9BQ89 295 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 SPCS1Q9Y6A9 102 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 CRYGCP07315 174 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 LINC01548A6NM66 108 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
SYNPO2-201ENST00000307142 FAM231BA6NCW3 169 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 H3BUT2 72 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 IGHG4P01861 327 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 Q6ZSR3 168 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 C15orf53Q8NAA6 179 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 TM2D2Q9BX73 214 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 HERVK_113P63121 156 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 LTAP01374 205 aa8.24□□□□□ -1.09
SYNPO2-201ENST00000307142 UBE2CO00762 179 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 DAZ2Q13117 558 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 DAZ4Q86SG3 579 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 DAZ3Q9NR90 486 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 NOTCH2Q04721 2471 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 E7EUB6 86 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 C5orf30Q96GV9 206 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 PRR20EP86478 221 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 PRR20CP86479 221 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 PRR20DP86480 221 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 PRR20BP86481 221 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 PRR20AP86496 221 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 ZNF503Q96F45 646 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 ANKHD1Q8IWZ3 2542 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 WI2-2373I1.2A0A1W2PRP0 233 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 IGKV1-17P01599 117 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 ORAOV1Q8WV07 137 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 SPATA25Q9BR10 227 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 CSPG4Q6UVK1 2322 aa8.23□□□□□ -1.09
SYNPO2-201ENST00000307142 SYS1-DBNDD2H3BUS1 97 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 ZC2HC1BQ5TFG8 222 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 Q8N1Y9 231 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 DEFB1P60022 68 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 TAL2Q16559 108 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 TIRAPP58753 221 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 DNAJC30Q96LL9 226 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 SMIM27A0A1W2PRY6 76 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 NDUFAF3Q9BU61 184 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 RPL32P62910 135 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 OVOL2Q9BRP0 275 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
SYNPO2-201ENST00000307142 C5orf38Q86SI9 138 aa8.21□□□□□ -1.09
SYNPO2-201ENST00000307142 HSD52Q0P140 79 aa8.21□□□□□ -1.1
SYNPO2-201ENST00000307142 TMEM263Q8WUH6 116 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-201ENST00000307142 SCRT2Q9NQ03 307 aa8.21□□□□□ -1.1
SYNPO2-201ENST00000307142 SMIM2Q9BVW6 85 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 EXPH5Q8NEV8 1989 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 SUMO4Q6EEV6 95 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 LINC00482Q8N8I6 264 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 SONP18583 2426 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 V9GYV3 84 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 Q6ZWC4 215 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 PIEZO2Q9H5I5 2752 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
SYNPO2-201ENST00000307142 COX7A2LO14548 114 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms