RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 YLPM1P49750 1951 aaKnown RBP11.66□□□□□ -0.54
SCN3B-201ENST00000299333 HIGD1BQ9P298 99 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 ZDBF2Q9HCK1 2354 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 OPRPNQ99935 248 aaPredicted RBP11.66□□□□□ -0.54
SCN3B-201ENST00000299333 GREB1Q4ZG55 1949 aa11.65□□□□□ -0.54
SCN3B-201ENST00000299333 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.54
SCN3B-201ENST00000299333 LINC01356Q8N9X3 169 aa11.65□□□□□ -0.54
SCN3B-201ENST00000299333 PTPRDP23468 1912 aa11.65□□□□□ -0.54
SCN3B-201ENST00000299333 LOXP28300 417 aaPredicted RBP11.65□□□□□ -0.54
SCN3B-201ENST00000299333 CCDC179H3BU77 68 aa11.65□□□□□ -0.54
SCN3B-201ENST00000299333 HIST2H2BCQ6DN03 193 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 ZSWIM8A7E2V4 1837 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 NOP10Q9NPE3 64 aaKnown RBP11.64□□□□□ -0.55
SCN3B-201ENST00000299333 IGKV1OR2-108A0A075B7D4 117 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 Q8TCH9 128 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 A0A0J9YY99 117 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 LECT2O14960 151 aa11.64□□□□□ -0.55
SCN3B-201ENST00000299333 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 IGHV1-69P01742 117 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 LHBP01229 141 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 PMAIP1Q13794 54 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 LRRC75A-AS1Q8N1F1 130 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 ANK1P16157 1881 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 LINC00694P0DN24 101 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 LINC00311Q8N616 119 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 IGKV2D-24A0A075B6R9 120 aa11.63□□□□□ -0.55
SCN3B-201ENST00000299333 C17orf82Q86X59 251 aaPredicted RBP11.63□□□□□ -0.55
SCN3B-201ENST00000299333 GATA4P43694 442 aa11.62□□□□□ -0.55
SCN3B-201ENST00000299333 SDIM1Q6ZPB5 146 aa11.62□□□□□ -0.55
SCN3B-201ENST00000299333 CD59P13987 128 aa11.62□□□□□ -0.55
SCN3B-201ENST00000299333 ZNF503-AS2A6NEH8 195 aa11.62□□□□□ -0.55
SCN3B-201ENST00000299333 VPREB1P12018 145 aa11.62□□□□□ -0.55
SCN3B-201ENST00000299333 RPL39P62891 51 aaKnown RBP11.62□□□□□ -0.55
SCN3B-201ENST00000299333 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
SCN3B-201ENST00000299333 H3BT86 120 aa11.61□□□□□ -0.55
SCN3B-201ENST00000299333 MSMBP08118 114 aa11.61□□□□□ -0.55
SCN3B-201ENST00000299333 GNLYP22749 145 aa11.61□□□□□ -0.55
SCN3B-201ENST00000299333 MAPK1IP1LQ8NDC0 245 aa11.61□□□□□ -0.55
SCN3B-201ENST00000299333 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 K7ERS5 55 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 RMI2Q96E14 147 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 NCR3O14931 201 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 GTSF1Q8WW33 167 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 IGLV10-54A0A075B6I4 117 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 JMJD7-PLA2G4BH0Y9G9 81 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 NDUFB1O75438 58 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
SCN3B-201ENST00000299333 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
SCN3B-201ENST00000299333 RSPO1Q2MKA7 263 aaPredicted RBP11.59□□□□□ -0.55
SCN3B-201ENST00000299333 FAM110AQ9BQ89 295 aa11.59□□□□□ -0.55
SCN3B-201ENST00000299333 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
SCN3B-201ENST00000299333 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
SCN3B-201ENST00000299333 CHD3Q12873 2000 aaKnown RBP11.59□□□□□ -0.55
SCN3B-201ENST00000299333 E9PLD3 99 aa11.59□□□□□ -0.55
SCN3B-201ENST00000299333 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 Q8N1Y9 231 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 ZNF524Q96C55 264 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 CACNA1EQ15878 2313 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 TCL1BO95988 128 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 GP9P14770 177 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 Q9HAA7 133 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
SCN3B-201ENST00000299333 HEATR5AQ86XA9 2040 aa11.57□□□□□ -0.56
SCN3B-201ENST00000299333 APOC4P55056 127 aa11.57□□□□□ -0.56
SCN3B-201ENST00000299333 CSRP1P21291 193 aaKnown RBP11.57□□□□□ -0.56
SCN3B-201ENST00000299333 CAMK2N2Q96S95 79 aa11.57□□□□□ -0.56
SCN3B-201ENST00000299333 PLXNA3P51805 1871 aa11.57□□□□□ -0.56
SCN3B-201ENST00000299333 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
SCN3B-201ENST00000299333 LENEPQ9Y5L5 61 aa11.56□□□□□ -0.56
SCN3B-201ENST00000299333 TIMM17AQ99595 171 aa11.56□□□□□ -0.56
SCN3B-201ENST00000299333 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
SCN3B-201ENST00000299333 IGHV4OR15-8A0A075B7B6 117 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 A0A087WW49 117 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 HIGD2BQ4VC39 106 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 IGKV2D-26A0A0A0MRZ7 120 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 ETV2O00321 342 aaPredicted RBP11.55□□□□□ -0.56
SCN3B-201ENST00000299333 ODF1Q14990 250 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 NDUFA11Q86Y39 141 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 CASP8AP2Q9UKL3 1982 aa11.55□□□□□ -0.56
SCN3B-201ENST00000299333 TEX49A0A1B0GTD5 131 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 COX7A2LO14548 114 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 PATE2Q6UY27 113 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 FANCD2OSQ96PS1 177 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 PRR15LQ9BU68 103 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 LYRM9A8MSI8 78 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
SCN3B-201ENST00000299333 ATP5EP56381 51 aaPredicted RBP11.53□□□□□ -0.56
SCN3B-201ENST00000299333 Q6ZS92 163 aa11.53□□□□□ -0.56
SCN3B-201ENST00000299333 WI2-2373I1.2A0A1W2PRP0 233 aa11.53□□□□□ -0.56
SCN3B-201ENST00000299333 K7EQD1 137 aa11.53□□□□□ -0.56
SCN3B-201ENST00000299333 GATA3P23771 443 aa11.53□□□□□ -0.56
SCN3B-201ENST00000299333 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
SCN3B-201ENST00000299333 ROS1P08922 2347 aa11.53□□□□□ -0.56
SCN3B-201ENST00000299333 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
SCN3B-201ENST00000299333 APRG1Q8IVJ8 170 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms