RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 CACNA1AO00555 2505 aa13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 WT1P19544 449 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 KRTAP27-1Q3LI81 207 aa13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 PRSS33Q8NF86 280 aa13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 DSCR8Q96T75 97 aa13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGHV7-81A0A0B4J1V7 117 aa13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 CLPSL2Q6UWE3 100 aa13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 NOP10Q9NPE3 64 aaKnown RBP13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 DEFB125Q8N687 156 aa13.12□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGKV2-29A2NJV5 120 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 Q9H8V8 135 aa13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGFL2Q6UWQ7 119 aa13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 NDUFC2O95298 119 aa13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGFBPL1Q8WX77 278 aa13.11□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGLV11-55A0A075B6I3 123 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 NPBQ8NG41 125 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 TRAV12-1A0A0B4J245 112 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 NUPR1O60356 82 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 C5orf47Q569G3 176 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 SVIPQ8NHG7 77 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 CTSGP08311 255 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 XCL1P47992 114 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 RMI2Q96E14 147 aa13.1□□□□□ -0.31
CNTNAP3-201ENST00000297668 CSPG4Q6UVK1 2322 aa13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 ANKRD29Q8N6D5 301 aa13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGHG4P01861 327 aa13.09□□□□□ -0.31
CNTNAP3-201ENST00000297668 CRYGCP07315 174 aa13.08□□□□□ -0.31
CNTNAP3-201ENST00000297668 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 Q71RC1 249 aaPredicted RBP13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 C15orf53Q8NAA6 179 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 LINC00173Q6ZV60 143 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 RITA1Q96K30 269 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
CNTNAP3-201ENST00000297668 AJUBAQ96IF1 538 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 BUB3O43684 328 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 NBL1P41271 181 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 LINC01545Q5VT33 79 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 FAM167A-AS1Q96KT0 104 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 CCL24O00175 119 aa13.07□□□□□ -0.32
CNTNAP3-201ENST00000297668 A0A0J9YY99 117 aa13.06□□□□□ -0.32
CNTNAP3-201ENST00000297668 TMEM258P61165 79 aa13.06□□□□□ -0.32
CNTNAP3-201ENST00000297668 MGAMO43451 1857 aa13.06□□□□□ -0.32
CNTNAP3-201ENST00000297668 BLCAPP62952 87 aa13.06□□□□□ -0.32
CNTNAP3-201ENST00000297668 J3QKU1 62 aa13.05□□□□□ -0.32
CNTNAP3-201ENST00000297668 BAALC-AS2P0C853 105 aa13.05□□□□□ -0.32
CNTNAP3-201ENST00000297668 C5orf38Q86SI9 138 aa13.05□□□□□ -0.32
CNTNAP3-201ENST00000297668 A0A0J9YXV3 536 aa13.05□□□□□ -0.32
CNTNAP3-201ENST00000297668 G3V4G9 280 aa13.05□□□□□ -0.32
CNTNAP3-201ENST00000297668 TDRG1Q3Y452 100 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 APRG1Q8IVJ8 170 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 IGLL5B9A064 214 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 C16orf54Q6UWD8 224 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 ZFP2Q6ZN57 461 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 MYO18BQ8IUG5 2567 aa13.04□□□□□ -0.32
CNTNAP3-201ENST00000297668 SLURP1P55000 103 aa13.03□□□□□ -0.32
CNTNAP3-201ENST00000297668 Q8N9W7 124 aa13.03□□□□□ -0.32
CNTNAP3-201ENST00000297668 RNF152Q8N8N0 203 aa13.03□□□□□ -0.32
CNTNAP3-201ENST00000297668 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
CNTNAP3-201ENST00000297668 Q6ZQT7 251 aa13.03□□□□□ -0.32
CNTNAP3-201ENST00000297668 CUL9Q8IWT3 2517 aa13.03□□□□□ -0.32
CNTNAP3-201ENST00000297668 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.33
CNTNAP3-201ENST00000297668 IGKV1OR2-108A0A075B7D4 117 aa13.02□□□□□ -0.33
CNTNAP3-201ENST00000297668 CGB3P0DN86 165 aa13.02□□□□□ -0.33
CNTNAP3-201ENST00000297668 ORMDL1Q9P0S3 153 aa13.02□□□□□ -0.33
CNTNAP3-201ENST00000297668 RS1O15537 224 aa13.02□□□□□ -0.33
CNTNAP3-201ENST00000297668 TRAV4A0A0B4J268 109 aa13.01□□□□□ -0.33
CNTNAP3-201ENST00000297668 RBM3P98179 157 aaKnown RBP13.01□□□□□ -0.33
CNTNAP3-201ENST00000297668 SH2D6Q7Z4S9 175 aa13.01□□□□□ -0.33
CNTNAP3-201ENST00000297668 IGHV4-30-2A0A087WSY4 118 aa13.01□□□□□ -0.33
CNTNAP3-201ENST00000297668 RBX1P62877 108 aa13.01□□□□□ -0.33
CNTNAP3-201ENST00000297668 PRAC2D3DTV9 90 aa13□□□□□ -0.33
CNTNAP3-201ENST00000297668 FREM1Q5H8C1 2179 aa13□□□□□ -0.33
CNTNAP3-201ENST00000297668 A4D1N5 150 aa13□□□□□ -0.33
CNTNAP3-201ENST00000297668 IGLV1-47P01700 117 aa13□□□□□ -0.33
CNTNAP3-201ENST00000297668 WI2-2373I1.2A0A1W2PRP0 233 aa13□□□□□ -0.33
CNTNAP3-201ENST00000297668 hADV29S1A0JD25 119 aa13□□□□□ -0.33
CNTNAP3-201ENST00000297668 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 TEX22C9J3V5 150 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 CGB7P0DN87 165 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 IGLV2-23P01705 113 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 MUSTN1Q8IVN3 82 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 IGF2-ASQ6U949 168 aa12.99□□□□□ -0.33
CNTNAP3-201ENST00000297668 C5orf56Q8N8D9 126 aa12.98□□□□□ -0.33
CNTNAP3-201ENST00000297668 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms