RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 TEX49A0A1B0GTD5 131 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 UQCRQO14949 82 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 IGFL4Q6B9Z1 124 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 C9orf139Q6ZV77 190 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
FUBP1-201ENST00000294623 SPXQ9BT56 116 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 PHLDA3Q9Y5J5 127 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
FUBP1-201ENST00000294623 POLR2KP53803 58 aaKnown RBP10.78□□□□□ -0.68
FUBP1-201ENST00000294623 RHOHQ15669 191 aa10.78□□□□□ -0.68
FUBP1-201ENST00000294623 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
FUBP1-201ENST00000294623 TRBV6-5A0A0K0K1A5 114 aa10.78□□□□□ -0.68
FUBP1-201ENST00000294623 S100A4P26447 101 aaKnown RBP10.78□□□□□ -0.68
FUBP1-201ENST00000294623 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
FUBP1-201ENST00000294623 J3KRW8 73 aa10.77□□□□□ -0.68
FUBP1-201ENST00000294623 COX7A1P24310 79 aa10.77□□□□□ -0.68
FUBP1-201ENST00000294623 RPS28P62857 69 aaKnown RBP10.77□□□□□ -0.68
FUBP1-201ENST00000294623 MUSTN1Q8IVN3 82 aa10.77□□□□□ -0.68
FUBP1-201ENST00000294623 FDCSPQ8NFU4 85 aa10.77□□□□□ -0.68
FUBP1-201ENST00000294623 J3KT08 172 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 OVOL1O14753 267 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 EIF4EBP3O60516 100 aaPredicted RBP10.77□□□□□ -0.69
FUBP1-201ENST00000294623 CXCL5P42830 114 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 ZNF56Q15929 161 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 ATP1A1-AS1Q5TC04 95 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 FAM110DQ8TAY7 271 aaPredicted RBP10.77□□□□□ -0.69
FUBP1-201ENST00000294623 FAM215AQ9Y5M1 114 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.69
FUBP1-201ENST00000294623 H7C423 109 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 TRIAP1O43715 76 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 NDUFA7O95182 113 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 MGPP08493 103 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 APRG1Q8IVJ8 170 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 RNF182Q8N6D2 247 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 LINC00526Q96FQ7 95 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 METTL26Q96S19 204 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 DYNLRB1Q9NP97 96 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 S4R3C0 116 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 LST1O00453 97 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 IGHV4-39P01824 125 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 LY6G5BQ8NDX9 201 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 CSDC2Q9Y534 153 aaKnown RBP10.76□□□□□ -0.69
FUBP1-201ENST00000294623 U3KQE9 123 aa10.76□□□□□ -0.69
FUBP1-201ENST00000294623 SVILO95425 2214 aa10.75□□□□□ -0.69
FUBP1-201ENST00000294623 WIPF1O43516 503 aa10.75□□□□□ -0.69
FUBP1-201ENST00000294623 NSUN5P1Q3KNT7 163 aa10.75□□□□□ -0.69
FUBP1-201ENST00000294623 LINC00643Q86TS7 51 aa10.75□□□□□ -0.69
FUBP1-201ENST00000294623 C14orf178Q8N769 122 aaPredicted RBP10.75□□□□□ -0.69
FUBP1-201ENST00000294623 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
FUBP1-201ENST00000294623 TRBV27A0A0K0K1C4 114 aa10.74□□□□□ -0.69
FUBP1-201ENST00000294623 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
FUBP1-201ENST00000294623 CD3EP07766 207 aa10.74□□□□□ -0.69
FUBP1-201ENST00000294623 Q8N6K4 173 aa10.74□□□□□ -0.69
FUBP1-201ENST00000294623 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
FUBP1-201ENST00000294623 CDH23Q9H251 3354 aa10.74□□□□□ -0.69
FUBP1-201ENST00000294623 M0R1W7 72 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 CDX4O14627 284 aaPredicted RBP10.73□□□□□ -0.69
FUBP1-201ENST00000294623 FAM27E3Q08E93 113 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 ITLN2Q8WWU7 325 aaPredicted RBP10.73□□□□□ -0.69
FUBP1-201ENST00000294623 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 ZNF256Q9Y2P7 627 aaPredicted RBP10.73□□□□□ -0.69
FUBP1-201ENST00000294623 KIF25-AS1Q9Y6Z4 181 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 A0A0G2JNJ9 132 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 ODF3BA8MYP8 253 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 Q9UFV3 132 aa10.73□□□□□ -0.69
FUBP1-201ENST00000294623 CLPSL1A2RUU4 121 aa10.72□□□□□ -0.69
FUBP1-201ENST00000294623 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
FUBP1-201ENST00000294623 CITED2Q99967 270 aaPredicted RBP10.72□□□□□ -0.69
FUBP1-201ENST00000294623 A0A0J9YXY3 114 aa10.72□□□□□ -0.69
FUBP1-201ENST00000294623 TIMM17BO60830 172 aa10.72□□□□□ -0.69
FUBP1-201ENST00000294623 TRGV11A0A075B6L2 103 aa10.71□□□□□ -0.69
FUBP1-201ENST00000294623 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
FUBP1-201ENST00000294623 H7C2G1 150 aa10.71□□□□□ -0.69
FUBP1-201ENST00000294623 EMP1P54849 157 aa10.71□□□□□ -0.69
FUBP1-201ENST00000294623 BSPH1Q075Z2 132 aa10.71□□□□□ -0.69
FUBP1-201ENST00000294623 OR13C6PQ8NH95 151 aa10.71□□□□□ -0.69
FUBP1-201ENST00000294623 FAM236AA0A1B0GUQ0 79 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 FAM236BA0A1B0GV22 79 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 NPFFO15130 113 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 ZNF22P17026 224 aaPredicted RBP10.7□□□□□ -0.7
FUBP1-201ENST00000294623 LINC00315P59091 139 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 NDPQ00604 133 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 EEF1AKMT3Q96AZ1 226 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 C16orf92Q96LL3 132 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 B9A039 149 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 IGHV3-23P01764 117 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 ELANEP08246 267 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 PRR9Q5T870 116 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 MINOS1Q5TGZ0 78 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 MINOS1-NBL1R4GNA1 71 aa10.7□□□□□ -0.7
FUBP1-201ENST00000294623 RNASE4P34096 147 aaKnown RBP10.69□□□□□ -0.7
FUBP1-201ENST00000294623 CADP27708 2225 aa10.69□□□□□ -0.7
FUBP1-201ENST00000294623 LAMA1P25391 3075 aa10.69□□□□□ -0.7
FUBP1-201ENST00000294623 SMIM9A6NGZ8 99 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms