RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TMEM141Q96I45 108 aa8.8□□□□□ -1
USP6NL-201ENST00000277575 TMEM243Q9BU79 118 aa8.8□□□□□ -1
USP6NL-201ENST00000277575 COL4A4P53420 1690 aaPredicted RBP8.8□□□□□ -1
USP6NL-201ENST00000277575 ZNF462Q96JM2 2506 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 GNRH2O43555 120 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 C10orf126Q8N4M7 172 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 SPAG8Q99932 426 aaPredicted RBP8.79□□□□□ -1
USP6NL-201ENST00000277575 PYGO2Q9BRQ0 406 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 PTPRSQ13332 1948 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 IGLV2-14P01704 120 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 ATXN8Q156A1 80 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 SIRPDQ9H106 197 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 FASNP49327 2511 aaKnown RBP8.79□□□□□ -1
USP6NL-201ENST00000277575 TEX22C9J3V5 150 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 E7EUB6 86 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 IGLV2-23P01705 113 aa8.79□□□□□ -1
USP6NL-201ENST00000277575 ARHGAP21Q5T5U3 1957 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 RBAKDNA6NC62 111 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
USP6NL-201ENST00000277575 CRYGCP07315 174 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 HLA-DRB4P13762 266 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 PRORYQ9H606 182 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 HLA-DRB4X5D2U9 266 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 ZNF106Q9H2Y7 1883 aaKnown RBP8.78□□□□□ -1
USP6NL-201ENST00000277575 GAGE6Q13070 117 aa8.78□□□□□ -1
USP6NL-201ENST00000277575 IGKV1OR2-108A0A075B7D4 117 aa8.77□□□□□ -1
USP6NL-201ENST00000277575 IGHV1-24A0A0C4DH33 117 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 LEPROTO15243 131 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 CGB3P0DN86 165 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 CGB7P0DN87 165 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 LMO4P61968 165 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 CFHR4Q92496 578 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 VWC2LB2RUY7 222 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 PROP1O75360 226 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 APRG1Q8IVJ8 170 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 MRPL36Q9P0J6 103 aaKnown RBP8.77□□□□□ -1.01
USP6NL-201ENST00000277575 POLR3KQ9Y2Y1 108 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-201ENST00000277575 INS-IGF2F8WCM5 200 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 IGHG2P01859 326 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 SRSF2Q01130 221 aaKnown RBP8.77□□□□□ -1.01
USP6NL-201ENST00000277575 KIR3DS1Q14943 382 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 C20orf78Q9BR46 151 aa8.77□□□□□ -1.01
USP6NL-201ENST00000277575 FN1P02751 2386 aaKnown RBP8.76□□□□□ -1.01
USP6NL-201ENST00000277575 C19orf84I3L1E1 186 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 SPRY2O43597 315 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 Q6ZWC4 215 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 C20orf144Q9BQM9 153 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 FAM167A-AS1Q96KT0 104 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 MRPL35Q9NZE8 188 aaKnown RBP8.76□□□□□ -1.01
USP6NL-201ENST00000277575 PLA2G2EQ9NZK7 142 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 U3KQE9 123 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 DCHS1Q96JQ0 3298 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 C16orf54Q6UWD8 224 aa8.76□□□□□ -1.01
USP6NL-201ENST00000277575 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
USP6NL-201ENST00000277575 IGF2BP2-AS1Q96M15 143 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 A0A096LPF7 62 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 PRRC2AP48634 2157 aaKnown RBP8.75□□□□□ -1.01
USP6NL-201ENST00000277575 F8VRH5 84 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 KMT2EQ8IZD2 1858 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 IGHV4OR15-8A0A075B7B6 117 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 A0A087WW49 117 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 C10orf142B7Z368 130 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 LGALS9BQ3B8N2 356 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 LGALS9CQ6DKI2 356 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 LRRK2Q5S007 2527 aa8.75□□□□□ -1.01
USP6NL-201ENST00000277575 PFN2P35080 140 aa8.74□□□□□ -1.01
USP6NL-201ENST00000277575 PCP4P48539 62 aa8.74□□□□□ -1.01
USP6NL-201ENST00000277575 PLA2G5P39877 138 aa8.74□□□□□ -1.01
USP6NL-201ENST00000277575 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
USP6NL-201ENST00000277575 FRYQ5TBA9 3013 aa8.74□□□□□ -1.01
USP6NL-201ENST00000277575 CD5LO43866 347 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 RHOHQ15669 191 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 KIAA1549LQ6ZVL6 1849 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 DLX4Q92988 240 aaPredicted RBP8.73□□□□□ -1.01
USP6NL-201ENST00000277575 C2orf70A6NJV1 201 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 K7EMT4 169 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 C9orf66Q5T8R8 295 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 Q6ZPA2 131 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 LINC00574Q9H8X3 128 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 WI2-2373I1.2A0A1W2PRP0 233 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 IGLC3P0DOY3 106 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 GPHB5Q86YW7 130 aa8.73□□□□□ -1.01
USP6NL-201ENST00000277575 ANGP03950 147 aaKnown RBP8.72□□□□□ -1.01
USP6NL-201ENST00000277575 IGLL1P15814 213 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 WIPF2Q8TF74 440 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-201ENST00000277575 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 PRAC2D3DTV9 90 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 LOXL1Q08397 574 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-201ENST00000277575 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-201ENST00000277575 UTF1Q5T230 341 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 MTURNQ8N3F0 131 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 LAMTOR3Q9UHA4 124 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-201ENST00000277575 CRIP3Q6Q6R5 217 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 PIFOQ8TCI5 191 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 C2orf82Q6UX34 121 aa8.72□□□□□ -1.01
USP6NL-201ENST00000277575 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms