RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CD40P25942 277 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 CXCL5P42830 114 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 TOMM6Q96B49 74 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 SHANK2-AS3Q9BTD1 123 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 HES7Q9BYE0 225 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 RIF1Q5UIP0 2472 aaKnown RBP7.04□□□□□ -1.28
PDGFC-201ENST00000274071 J3QQQ9 107 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 AMELXQ99217 191 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 DNAJC13O75165 2243 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 TRGV3P03979 118 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 C17orf58Q2M2W7 97 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 HCP5Q6MZN7 132 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 AGPAT4-IT1Q9H0P7 198 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 ZNRD1Q9P1U0 126 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 V9GYY9 64 aa7.04□□□□□ -1.28
PDGFC-201ENST00000274071 ZFHX2Q9C0A1 2572 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-201ENST00000274071 C11orf86A6NJI1 115 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 SDIM1Q6ZPB5 146 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 LYPD1Q8N2G4 141 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 ZNRF1Q8ND25 227 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 OTOGLQ3ZCN5 2332 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 URB1O60287 2271 aaKnown RBP7.03□□□□□ -1.28
PDGFC-201ENST00000274071 FAM186AA6NE01 2351 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 CGB3P0DN86 165 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 CGB7P0DN87 165 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 ERCC8Q13216 396 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 RHOHQ15669 191 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 COX8CQ7Z4L0 72 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 MBD3L2Q8NHZ7 208 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-201ENST00000274071 TPSG1Q9NRR2 321 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 SPTBN2O15020 2390 aa7.03□□□□□ -1.28
PDGFC-201ENST00000274071 IGKV3D-15A0A087WSY6 115 aa7.02□□□□□ -1.28
PDGFC-201ENST00000274071 LY6LH3BQJ8 138 aa7.02□□□□□ -1.28
PDGFC-201ENST00000274071 Q6ZT83 130 aa7.02□□□□□ -1.28
PDGFC-201ENST00000274071 LAMA5O15230 3695 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 MGAQ8IWI9 3026 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 IGKV1D-17A0A075B6S4 117 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 IQCF6A8MYZ5 107 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 MAGEA5P43359 124 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 CLEC2BQ92478 149 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 TTTY12Q9BZ98 90 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 FAM27E3Q08E93 113 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 ATP1A1-AS1Q5TC04 95 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 LINC00311Q8N616 119 aa7.02□□□□□ -1.29
PDGFC-201ENST00000274071 CNOT1A5YKK6 2376 aaKnown RBP7.01□□□□□ -1.29
PDGFC-201ENST00000274071 DCHS1Q96JQ0 3298 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 IGLV4-69A0A075B6H9 119 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-201ENST00000274071 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-201ENST00000274071 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 Q8TAT8 98 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 SCNM1Q9BWG6 230 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-201ENST00000274071 UBE2E1P51965 193 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 PLGLAQ15195 96 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
PDGFC-201ENST00000274071 SPENQ96T58 3664 aaKnown RBP7□□□□□ -1.29
PDGFC-201ENST00000274071 CCL8P80075 99 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 DEFB124Q8NES8 71 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 ICOSQ9Y6W8 199 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 PTPRZ1P23471 2315 aaPredicted RBP7□□□□□ -1.29
PDGFC-201ENST00000274071 LST1O00453 97 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 APELAP0DMC3 54 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 SERP2Q8N6R1 65 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 TMEM167AQ8TBQ9 72 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 DCANP1Q8TF63 244 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 CXXC4Q9H2H0 198 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 PEMTQ9UBM1 199 aa7□□□□□ -1.29
PDGFC-201ENST00000274071 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
PDGFC-201ENST00000274071 TRAV8-3A0A0A6YYJ7 113 aa6.99□□□□□ -1.29
PDGFC-201ENST00000274071 FAM216BQ8N7L0 139 aa6.99□□□□□ -1.29
PDGFC-201ENST00000274071 MDS2Q8NDY4 140 aa6.99□□□□□ -1.29
PDGFC-201ENST00000274071 MUC6Q6W4X9 2439 aa6.99□□□□□ -1.29
PDGFC-201ENST00000274071 ZNF292O60281 2723 aa6.99□□□□□ -1.29
PDGFC-201ENST00000274071 COX6CP09669 75 aa6.99□□□□□ -1.29
PDGFC-201ENST00000274071 WT1P19544 449 aaPredicted RBP6.98□□□□□ -1.29
PDGFC-201ENST00000274071 PVRIGQ6DKI7 326 aa6.98□□□□□ -1.29
PDGFC-201ENST00000274071 PRORYQ9H606 182 aa6.98□□□□□ -1.29
PDGFC-201ENST00000274071 BOD1L1Q8NFC6 3051 aa6.98□□□□□ -1.29
PDGFC-201ENST00000274071 TSHBP01222 138 aa6.98□□□□□ -1.29
PDGFC-201ENST00000274071 LGALS3P17931 250 aaKnown RBP6.98□□□□□ -1.29
PDGFC-201ENST00000274071 TIMM21Q9BVV7 248 aa6.98□□□□□ -1.29
PDGFC-201ENST00000274071 DEFB127Q9H1M4 99 aa6.98□□□□□ -1.29
PDGFC-201ENST00000274071 H3BRN7 92 aa6.97□□□□□ -1.29
PDGFC-201ENST00000274071 AVPP01185 164 aa6.97□□□□□ -1.29
PDGFC-201ENST00000274071 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
PDGFC-201ENST00000274071 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
PDGFC-201ENST00000274071 Q6ZSV7 163 aa6.97□□□□□ -1.29
PDGFC-201ENST00000274071 PRSS2P07478 247 aa6.96□□□□□ -1.29
PDGFC-201ENST00000274071 KLRB1Q12918 225 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms