RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 IGHV4-4A0A075B6R2 117 aa17.23■□□□□ 0.35
RAB40B-201ENST00000269347 PET117Q6UWS5 81 aa17.23■□□□□ 0.35
RAB40B-201ENST00000269347 SETXQ7Z333 2677 aaKnown RBP17.23■□□□□ 0.35
RAB40B-201ENST00000269347 OR1N2Q8NGR9 330 aa17.22■□□□□ 0.35
RAB40B-201ENST00000269347 TRAV12-3A0A0B4J271 114 aa17.21■□□□□ 0.35
RAB40B-201ENST00000269347 TSPOP30536 169 aa17.21■□□□□ 0.35
RAB40B-201ENST00000269347 SPANXN1Q5VSR9 72 aa17.21■□□□□ 0.35
RAB40B-201ENST00000269347 H0Y8G0 127 aa17.21■□□□□ 0.34
RAB40B-201ENST00000269347 M0R381 172 aa17.21■□□□□ 0.34
RAB40B-201ENST00000269347 A0A1W2PRX2 142 aa17.2■□□□□ 0.34
RAB40B-201ENST00000269347 TNFRSF6BO95407 300 aa17.2■□□□□ 0.34
RAB40B-201ENST00000269347 CD28P10747 220 aa17.2■□□□□ 0.34
RAB40B-201ENST00000269347 PMCHL2Q9BQD1 86 aa17.2■□□□□ 0.34
RAB40B-201ENST00000269347 SCRT2Q9NQ03 307 aa17.2■□□□□ 0.34
RAB40B-201ENST00000269347 LAMTOR2Q9Y2Q5 125 aa17.2■□□□□ 0.34
RAB40B-201ENST00000269347 OR9G4Q8NGQ1 327 aa17.19■□□□□ 0.34
RAB40B-201ENST00000269347 TRBV7-9A0A0J9YWB2 115 aa17.19■□□□□ 0.34
RAB40B-201ENST00000269347 COL5A1-AS1Q5SY13 56 aa17.19■□□□□ 0.34
RAB40B-201ENST00000269347 TMEM61Q8N0U2 210 aa17.19■□□□□ 0.34
RAB40B-201ENST00000269347 ZNF747Q9BV97 191 aa17.19■□□□□ 0.34
RAB40B-201ENST00000269347 TP73-AS1Q9UF72 201 aa17.19■□□□□ 0.34
RAB40B-201ENST00000269347 TCF21O43680 179 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 SPINK13Q1W4C9 94 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 NRACQ8N912 160 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 RAX2Q96IS3 184 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 ST20Q9HBF5 79 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 MRPS16Q9Y3D3 137 aaKnown RBP17.18■□□□□ 0.34
RAB40B-201ENST00000269347 hDV102S1A0JD36 115 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 KNCNA6PVL3 124 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 G0S2P27469 103 aa17.18■□□□□ 0.34
RAB40B-201ENST00000269347 SNRPD3P62318 126 aaKnown RBP17.18■□□□□ 0.34
RAB40B-201ENST00000269347 ASIPP42127 132 aa17.17■□□□□ 0.34
RAB40B-201ENST00000269347 AMTNQ6UX39 209 aa17.17■□□□□ 0.34
RAB40B-201ENST00000269347 HSBP1L1C9JCN9 74 aa17.16■□□□□ 0.34
RAB40B-201ENST00000269347 IGLV2-18A0A075B6J9 118 aa17.16■□□□□ 0.34
RAB40B-201ENST00000269347 ZNF25P17030 456 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-201ENST00000269347 S100A4P26447 101 aaKnown RBP17.16■□□□□ 0.34
RAB40B-201ENST00000269347 DPF1Q92782 380 aa17.16■□□□□ 0.34
RAB40B-201ENST00000269347 JPT2Q9H910 190 aa17.16■□□□□ 0.34
RAB40B-201ENST00000269347 RBMY1A1P0DJD3 496 aaKnown RBP17.15■□□□□ 0.34
RAB40B-201ENST00000269347 RBMY1CP0DJD4 496 aa17.15■□□□□ 0.34
RAB40B-201ENST00000269347 RBMY1FQ15415 496 aaKnown RBP17.15■□□□□ 0.34
RAB40B-201ENST00000269347 LINC01545Q5VT33 79 aa17.15■□□□□ 0.34
RAB40B-201ENST00000269347 C14orf178Q8N769 122 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-201ENST00000269347 LINC01006Q8NI28 216 aa17.15■□□□□ 0.34
RAB40B-201ENST00000269347 C7orf71A4D174 169 aa17.15■□□□□ 0.34
RAB40B-201ENST00000269347 CACNG7P62955 275 aa17.15■□□□□ 0.34
RAB40B-201ENST00000269347 HIVEP2P31629 2446 aa17.15■□□□□ 0.34
RAB40B-201ENST00000269347 RBMY1BA6NDE4 496 aaKnown RBP17.14■□□□□ 0.33
RAB40B-201ENST00000269347 RBMY1EA6NEQ0 496 aaKnown RBP17.14■□□□□ 0.33
RAB40B-201ENST00000269347 RBMY1DP0C7P1 496 aaKnown RBP17.14■□□□□ 0.33
RAB40B-201ENST00000269347 SAMD13Q5VXD3 122 aa17.14■□□□□ 0.33
RAB40B-201ENST00000269347 DEFB131AP59861 70 aa17.13■□□□□ 0.33
RAB40B-201ENST00000269347 CITED2Q99967 270 aaPredicted RBP17.13■□□□□ 0.33
RAB40B-201ENST00000269347 STPG4Q8N801 248 aa17.13■□□□□ 0.33
RAB40B-201ENST00000269347 OR2K2Q8NGT1 345 aa17.13■□□□□ 0.33
RAB40B-201ENST00000269347 PHLDA3Q9Y5J5 127 aa17.13■□□□□ 0.33
RAB40B-201ENST00000269347 PPBPP02775 128 aa17.12■□□□□ 0.33
RAB40B-201ENST00000269347 TEX29Q8N6K0 151 aa17.12■□□□□ 0.33
RAB40B-201ENST00000269347 MAP1LC3AQ9H492 121 aa17.12■□□□□ 0.33
RAB40B-201ENST00000269347 MDFICQ9P1T7 246 aa17.12■□□□□ 0.33
RAB40B-201ENST00000269347 PRM2P04554 102 aa17.12■□□□□ 0.33
RAB40B-201ENST00000269347 HINT1P49773 126 aaPredicted RBP17.12■□□□□ 0.33
RAB40B-201ENST00000269347 RNASE1P07998 156 aaKnown RBP17.11■□□□□ 0.33
RAB40B-201ENST00000269347 LINC01546A6NGU7 62 aa17.11■□□□□ 0.33
RAB40B-201ENST00000269347 HBDP02042 147 aa17.11■□□□□ 0.33
RAB40B-201ENST00000269347 CD7P09564 240 aa17.11■□□□□ 0.33
RAB40B-201ENST00000269347 DEFB114Q30KQ6 69 aa17.11■□□□□ 0.33
RAB40B-201ENST00000269347 CD300EQ496F6 205 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-201ENST00000269347 FAM159AQ6UWV7 190 aa17.11■□□□□ 0.33
RAB40B-201ENST00000269347 RPL39LQ96EH5 51 aaKnown RBP17.11■□□□□ 0.33
RAB40B-201ENST00000269347 FOXI2Q6ZQN5 318 aa17.1■□□□□ 0.33
RAB40B-201ENST00000269347 ODF3Q96PU9 254 aa17.1■□□□□ 0.33
RAB40B-201ENST00000269347 TMEM208Q9BTX3 173 aa17.1■□□□□ 0.33
RAB40B-201ENST00000269347 CDKN1BP46527 198 aa17.09■□□□□ 0.33
RAB40B-201ENST00000269347 LINC00315P59091 139 aa17.09■□□□□ 0.33
RAB40B-201ENST00000269347 FHL3Q13643 280 aa17.09■□□□□ 0.33
RAB40B-201ENST00000269347 RASL10AQ92737 203 aa17.09■□□□□ 0.33
RAB40B-201ENST00000269347 MED14OSP0DP75 135 aa17.09■□□□□ 0.33
RAB40B-201ENST00000269347 KIF25-AS1Q9Y6Z4 181 aa17.09■□□□□ 0.33
RAB40B-201ENST00000269347 JMJD1CQ15652 2540 aa17.08■□□□□ 0.33
RAB40B-201ENST00000269347 LEPP41159 167 aa17.08■□□□□ 0.33
RAB40B-201ENST00000269347 SLC25A34Q6PIV7 304 aa17.08■□□□□ 0.33
RAB40B-201ENST00000269347 Q8N1Y9 231 aa17.08■□□□□ 0.33
RAB40B-201ENST00000269347 PEMTQ9UBM1 199 aa17.08■□□□□ 0.33
RAB40B-201ENST00000269347 IGHV3-16A0A0C4DH30 117 aa17.08■□□□□ 0.32
RAB40B-201ENST00000269347 NXPH4O95158 308 aa17.08■□□□□ 0.32
RAB40B-201ENST00000269347 SMIM15Q7Z3B0 74 aa17.07■□□□□ 0.32
RAB40B-201ENST00000269347 C18orf15Q96N68 181 aa17.07■□□□□ 0.32
RAB40B-201ENST00000269347 DLEU1O43261 78 aa17.06■□□□□ 0.32
RAB40B-201ENST00000269347 LY6G6DO95868 133 aa17.06■□□□□ 0.32
RAB40B-201ENST00000269347 ZNF256Q9Y2P7 627 aaPredicted RBP17.06■□□□□ 0.32
RAB40B-201ENST00000269347 CCL24O00175 119 aa17.06■□□□□ 0.32
RAB40B-201ENST00000269347 MAP6D1Q9H9H5 199 aa17.06■□□□□ 0.32
RAB40B-201ENST00000269347 H3BMM0 161 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 MGPP08493 103 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 Q8N8P6 123 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 DPH3P1Q9H4G8 78 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 C16orf95Q9H693 158 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 NSD1Q96L73 2696 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms