RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 GNRH2O43555 120 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 EMP1P54849 157 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 ITLN2Q8WWU7 325 aaPredicted RBP12.92□□□□□ -0.34
SPG7-201ENST00000268704 TOMM6Q96B49 74 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 BPESC1Q9GZL8 116 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 ACACBO00763 2458 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 LGALS1P09382 135 aaKnown RBP12.92□□□□□ -0.34
SPG7-201ENST00000268704 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
SPG7-201ENST00000268704 C2orf66Q6UXQ4 117 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 BAALCQ8WXS3 180 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 UBTD1Q9HAC8 227 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 PHLDA3Q9Y5J5 127 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 CRYBG3Q68DQ2 2970 aa12.91□□□□□ -0.34
SPG7-201ENST00000268704 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
SPG7-201ENST00000268704 RRN3P1Q2M238 152 aa12.91□□□□□ -0.34
SPG7-201ENST00000268704 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
SPG7-201ENST00000268704 NDUFS8O00217 210 aa12.91□□□□□ -0.34
SPG7-201ENST00000268704 PRADC1Q9BSG0 188 aa12.91□□□□□ -0.34
SPG7-201ENST00000268704 CREBBPQ92793 2442 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 TRAV12-1A0A0B4J245 112 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 NPFFO15130 113 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 TGFAP01135 160 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 IGHV3-11P01762 117 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 ARL3P36405 182 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 TAL2Q16559 108 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 PLEKHB2Q96CS7 222 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 GEMIN7Q9H840 131 aaKnown RBP12.9□□□□□ -0.34
SPG7-201ENST00000268704 KLK9Q2XQG4 91 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 ORMDL2Q53FV1 153 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 KLK9Q9UKQ9 250 aa12.9□□□□□ -0.34
SPG7-201ENST00000268704 TRAV41A0A0B4J266 112 aa12.9□□□□□ -0.35
SPG7-201ENST00000268704 F8W1H4 67 aa12.9□□□□□ -0.35
SPG7-201ENST00000268704 BRD3OSQ6XYD6 125 aa12.9□□□□□ -0.35
SPG7-201ENST00000268704 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.35
SPG7-201ENST00000268704 KLHL30-AS1Q8NEE0 82 aa12.9□□□□□ -0.35
SPG7-201ENST00000268704 DPH3P1Q9H4G8 78 aa12.9□□□□□ -0.35
SPG7-201ENST00000268704 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
SPG7-201ENST00000268704 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
SPG7-201ENST00000268704 A0A1B0GWB2 263 aa12.89□□□□□ -0.35
SPG7-201ENST00000268704 ASIPP42127 132 aa12.89□□□□□ -0.35
SPG7-201ENST00000268704 DUSP14O95147 198 aaKnown RBP12.88□□□□□ -0.35
SPG7-201ENST00000268704 SRD5A1P18405 259 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 OR10J6PQ8NGY7 276 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 ZNF815PA8K554 130 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 PTH2Q96A98 100 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 PRO0461Q9UI25 63 aa12.88□□□□□ -0.35
SPG7-201ENST00000268704 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
SPG7-201ENST00000268704 SLC25A16P16260 332 aa12.87□□□□□ -0.35
SPG7-201ENST00000268704 LMO4P61968 165 aa12.87□□□□□ -0.35
SPG7-201ENST00000268704 JPT2Q9H910 190 aa12.87□□□□□ -0.35
SPG7-201ENST00000268704 SS18L2Q9UHA2 77 aa12.87□□□□□ -0.35
SPG7-201ENST00000268704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.353e-9■■■■□ 24.4
SPG7-201ENST00000268704 RNASE3P12724 160 aaKnown RBP12.87□□□□□ -0.35
SPG7-201ENST00000268704 SCGB1D4Q6XE38 83 aa12.87□□□□□ -0.35
SPG7-201ENST00000268704 EDN2P20800 178 aa12.86□□□□□ -0.35
SPG7-201ENST00000268704 SOCS3O14543 225 aa12.86□□□□□ -0.35
SPG7-201ENST00000268704 MT-ATP8P03928 68 aa12.86□□□□□ -0.35
SPG7-201ENST00000268704 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
SPG7-201ENST00000268704 LINC00477Q96M19 166 aa12.86□□□□□ -0.35
SPG7-201ENST00000268704 CELSR2Q9HCU4 2923 aa12.86□□□□□ -0.35
SPG7-201ENST00000268704 MRPL16Q9NX20 251 aaKnown RBP12.85□□□□□ -0.35
SPG7-201ENST00000268704 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
SPG7-201ENST00000268704 LY6EQ16553 131 aa12.85□□□□□ -0.35
SPG7-201ENST00000268704 CRYGDP07320 174 aa12.85□□□□□ -0.35
SPG7-201ENST00000268704 ZNF418Q8TF45 676 aaPredicted RBP12.85□□□□□ -0.35
SPG7-201ENST00000268704 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
SPG7-201ENST00000268704 RPL39P62891 51 aaKnown RBP12.84□□□□□ -0.35
SPG7-201ENST00000268704 SORL1Q92673 2214 aa12.84□□□□□ -0.35
SPG7-201ENST00000268704 TSHBP01222 138 aa12.84□□□□□ -0.35
SPG7-201ENST00000268704 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
SPG7-201ENST00000268704 MOB4Q9Y3A3 225 aa12.84□□□□□ -0.35
SPG7-201ENST00000268704 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
SPG7-201ENST00000268704 C11orf86A6NJI1 115 aa12.83□□□□□ -0.36
SPG7-201ENST00000268704 J3QR89 54 aa12.83□□□□□ -0.36
SPG7-201ENST00000268704 SRSF9Q13242 221 aaKnown RBP eCLIP12.83□□□□□ -0.362e-7■■■□□ 15.7
SPG7-201ENST00000268704 A0A087WWL8 130 aa12.83□□□□□ -0.36
SPG7-201ENST00000268704 TP53TG1Q9Y2A0 90 aa12.83□□□□□ -0.36
SPG7-201ENST00000268704 FAM223BA6NKX1 122 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 APOMO95445 188 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 SPINK8P0C7L1 97 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 FAM223AQ8IWN6 122 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 COX6B1P14854 86 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 LOC107984156A0A0G2JMH3 177 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 TMEM238LA0A1B0GVL6 79 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 OVOL1O14753 267 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 FHL3Q13643 280 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 Q6ZS46 218 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 ARL17AQ8IVW1 177 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
SPG7-201ENST00000268704 IGLV4-69A0A075B6H9 119 aa12.81□□□□□ -0.36
SPG7-201ENST00000268704 RNF183Q96D59 192 aa12.81□□□□□ -0.36
SPG7-201ENST00000268704 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
SPG7-201ENST00000268704 KLRB1Q12918 225 aa12.81□□□□□ -0.36
SPG7-201ENST00000268704 CSMD2Q7Z408 3487 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 LINC01619G3V211 115 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 TSPAN13O95857 204 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 LINC00315P59091 139 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms