RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
TIMP3-201ENST00000266085 KIR3DS1Q14943 382 aa11.98□□□□□ -0.49
TIMP3-201ENST00000266085 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
TIMP3-201ENST00000266085 DNAH12Q6ZR08 3092 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 ARHGAP32A7KAX9 2087 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 CFHR4Q92496 578 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
TIMP3-201ENST00000266085 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 LINC00574Q9H8X3 128 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 PGPEP1Q9NXJ5 209 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
TIMP3-201ENST00000266085 WIPF2Q8TF74 440 aaPredicted RBP11.97□□□□□ -0.49
TIMP3-201ENST00000266085 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.49
TIMP3-201ENST00000266085 IGHG2P01859 326 aa11.96□□□□□ -0.49
TIMP3-201ENST00000266085 HLA-DRB4P13762 266 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 PCP4P48539 62 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 GATD1Q8NB37 220 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 HLA-DRB4X5D2U9 266 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 F8VRH5 84 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 CD5LO43866 347 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 C16orf54Q6UWD8 224 aa11.96□□□□□ -0.5
TIMP3-201ENST00000266085 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.5
TIMP3-201ENST00000266085 IGLC2P0DOY2 106 aa11.95□□□□□ -0.5
TIMP3-201ENST00000266085 IGLC3P0DOY3 106 aa11.95□□□□□ -0.5
TIMP3-201ENST00000266085 MTORP42345 2549 aa11.95□□□□□ -0.5
TIMP3-201ENST00000266085 LEPROTO15243 131 aa11.95□□□□□ -0.5
TIMP3-201ENST00000266085 P0C879 139 aa11.95□□□□□ -0.5
TIMP3-201ENST00000266085 PSCAO43653 123 aa11.95□□□□□ -0.5
TIMP3-201ENST00000266085 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 DLEU1O43261 78 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 ZNF493Q6ZR52 646 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 WI2-2373I1.2A0A1W2PRP0 233 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 IGLL1P15814 213 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 LOXL1Q08397 574 aaPredicted RBP11.94□□□□□ -0.5
TIMP3-201ENST00000266085 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
TIMP3-201ENST00000266085 SPRY2O43597 315 aa11.93□□□□□ -0.5
TIMP3-201ENST00000266085 IGHV4OR15-8A0A075B7B6 117 aa11.93□□□□□ -0.5
TIMP3-201ENST00000266085 A0A087WW49 117 aa11.93□□□□□ -0.5
TIMP3-201ENST00000266085 MTURNQ8N3F0 131 aa11.93□□□□□ -0.5
TIMP3-201ENST00000266085 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
TIMP3-201ENST00000266085 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
TIMP3-201ENST00000266085 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
TIMP3-201ENST00000266085 GAGE6Q13070 117 aa11.92□□□□□ -0.5
TIMP3-201ENST00000266085 K7EMT4 169 aa11.92□□□□□ -0.5
TIMP3-201ENST00000266085 U3KQE9 123 aa11.92□□□□□ -0.5
TIMP3-201ENST00000266085 TNFRSF13BO14836 293 aaPredicted RBP11.91□□□□□ -0.5
TIMP3-201ENST00000266085 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
TIMP3-201ENST00000266085 ZNF843Q8N446 348 aa11.91□□□□□ -0.5
TIMP3-201ENST00000266085 NOP10Q9NPE3 64 aaKnown RBP11.91□□□□□ -0.5
TIMP3-201ENST00000266085 A6NDX4 124 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 EREGO14944 169 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 KLF12Q9Y4X4 402 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 ODF3BA8MYP8 253 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 RHOHQ15669 191 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
TIMP3-201ENST00000266085 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
TIMP3-201ENST00000266085 IGF2BP2-AS1Q96M15 143 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 ZNF747Q9BV97 191 aa11.9□□□□□ -0.5
TIMP3-201ENST00000266085 TMEM89A2RUT3 159 aa11.9□□□□□ -0.51
TIMP3-201ENST00000266085 K7EMI3 77 aa11.9□□□□□ -0.51
TIMP3-201ENST00000266085 FSTL3O95633 263 aa11.9□□□□□ -0.51
TIMP3-201ENST00000266085 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.51
TIMP3-201ENST00000266085 C2orf70A6NJV1 201 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 COX8AP10176 69 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 WFDC11Q8NEX6 87 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
TIMP3-201ENST00000266085 NDUFA12Q9UI09 145 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
TIMP3-201ENST00000266085 ZNF561-AS1K7EIQ3 104 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 RNF152Q8N8N0 203 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 GATA1P15976 413 aaPredicted RBP11.88□□□□□ -0.51
TIMP3-201ENST00000266085 PKD1L2Q7Z442 2459 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 PFN2P35080 140 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
TIMP3-201ENST00000266085 NUP210LQ5VU65 1888 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 PRRC2CQ9Y520 2896 aaKnown RBP11.87□□□□□ -0.51
TIMP3-201ENST00000266085 C9orf66Q5T8R8 295 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 LRP4O75096 1905 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 A0A096LPF7 62 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 DEFB1P60022 68 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 C11orf71Q6IPW1 123 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 DKK2Q9UBU2 259 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 COX11Q9Y6N1 276 aa11.87□□□□□ -0.51
TIMP3-201ENST00000266085 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
TIMP3-201ENST00000266085 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
TIMP3-201ENST00000266085 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
TIMP3-201ENST00000266085 TRAV8-4A0A0B4J246 113 aa11.86□□□□□ -0.51
TIMP3-201ENST00000266085 A0A1B0GV72 72 aa11.86□□□□□ -0.51
TIMP3-201ENST00000266085 POLQO75417 2590 aa11.86□□□□□ -0.51
TIMP3-201ENST00000266085 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms