RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PRSS47A8MTI9 375 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 ZNF48Q96MX3 618 aaPredicted RBP10.29□□□□□ -0.76
VHL-201ENST00000256474 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 TRBV7-1A0A0A6YYK4 115 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 GATD1Q8NB37 220 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 MOB4Q9Y3A3 225 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 H3BMG7 143 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 APOMO95445 188 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
VHL-201ENST00000256474 ATP5J2P56134 94 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 LOC107984156A0A0G2JMH3 177 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 EBI3Q14213 229 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 HIST2H2BDQ6DRA6 164 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 ARL17AQ8IVW1 177 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 NPFFR1Q9GZQ6 430 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 IGHV4-39P01824 125 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 CD7P09564 240 aa10.28□□□□□ -0.76
VHL-201ENST00000256474 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
VHL-201ENST00000256474 ZNF479Q96JC4 524 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 SMIM2Q9BVW6 85 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 C10orf99Q6UWK7 81 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 C1orf122Q6ZSJ8 110 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 SH2D6Q7Z4S9 175 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.778e-7■■■□□ 15.3
VHL-201ENST00000256474 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 NRACQ8N912 160 aa10.27□□□□□ -0.77
VHL-201ENST00000256474 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
VHL-201ENST00000256474 H7C2G1 150 aa10.26□□□□□ -0.77
VHL-201ENST00000256474 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
VHL-201ENST00000256474 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
VHL-201ENST00000256474 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 WFDC2Q14508 124 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 AJUBAQ96IF1 538 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 NAV2Q8IVL1 2488 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 RPL39P62891 51 aaKnown RBP10.25□□□□□ -0.77
VHL-201ENST00000256474 UCNP55089 124 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 C9orf139Q6ZV77 190 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 CEND1Q8N111 149 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
VHL-201ENST00000256474 IGHV1-69DA0A0B4J2H0 117 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 DUSP14O95147 198 aaKnown RBP10.24□□□□□ -0.77
VHL-201ENST00000256474 IGHV1-69P01742 117 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 A0A087WX48 190 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 SLC25A16P16260 332 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 PSMG4Q5JS54 123 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 ZNF56Q15929 161 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 RASL10AQ92737 203 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 CCL19Q99731 98 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
VHL-201ENST00000256474 ZNF418Q8TF45 676 aaPredicted RBP10.23□□□□□ -0.77
VHL-201ENST00000256474 CFAP46Q8IYW2 2715 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 H7C1H1 209 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 ZFAND2AQ8N6M9 145 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 MRPL16Q9NX20 251 aaKnown RBP10.23□□□□□ -0.77
VHL-201ENST00000256474 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
VHL-201ENST00000256474 RBAKDNA6NC62 111 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
VHL-201ENST00000256474 TP53TG1Q9Y2A0 90 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 F8VRH5 84 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 C12orf74Q32Q52 190 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 CNFNQ9BYD5 112 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
VHL-201ENST00000256474 SIVA1O15304 175 aa10.21□□□□□ -0.77
VHL-201ENST00000256474 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
VHL-201ENST00000256474 PIMREGQ9BSJ6 248 aa10.21□□□□□ -0.77
VHL-201ENST00000256474 ORMDL2Q53FV1 153 aa10.21□□□□□ -0.78
VHL-201ENST00000256474 GPHB5Q86YW7 130 aa10.21□□□□□ -0.78
VHL-201ENST00000256474 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.78
VHL-201ENST00000256474 FBN2P35556 2912 aa10.21□□□□□ -0.78
VHL-201ENST00000256474 PRM2P04554 102 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 OR5A1Q8NGJ0 315 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 ITLN2Q8WWU7 325 aaPredicted RBP10.2□□□□□ -0.78
VHL-201ENST00000256474 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 PLNP26678 52 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 IGLL5B9A064 214 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
VHL-201ENST00000256474 OVOL1O14753 267 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 PSMB2P49721 201 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 EPG5Q9HCE0 2579 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 MYMXA0A1B0GTQ4 84 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 FAM223BA6NKX1 122 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms