RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
NDFIP1-201ENST00000253814 UCNP55089 124 aa13.54□□□□□ -0.24
NDFIP1-201ENST00000253814 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
NDFIP1-201ENST00000253814 HOXB4P17483 251 aaPredicted RBP13.54□□□□□ -0.24
NDFIP1-201ENST00000253814 ZFP36P26651 326 aaKnown RBP13.54□□□□□ -0.24
NDFIP1-201ENST00000253814 IGKV3OR2-268A0A0C4DH90 116 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 VCYO14598 125 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 MYO18BQ8IUG5 2567 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 SDHAF1A6NFY7 115 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 C9JAW5 83 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 SNCGO76070 127 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 RRN3P1Q2M238 152 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 SPXQ9BT56 116 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 ERG28Q9UKR5 140 aa13.53□□□□□ -0.24
NDFIP1-201ENST00000253814 IGF1P05019 195 aa13.52□□□□□ -0.24
NDFIP1-201ENST00000253814 IGLC6P0CF74 106 aa13.52□□□□□ -0.24
NDFIP1-201ENST00000253814 DYNLRB2Q8TF09 96 aa13.52□□□□□ -0.24
NDFIP1-201ENST00000253814 KLK9Q9UKQ9 250 aa13.52□□□□□ -0.24
NDFIP1-201ENST00000253814 CD28P10747 220 aa13.52□□□□□ -0.25
NDFIP1-201ENST00000253814 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.25
NDFIP1-201ENST00000253814 KNCNA6PVL3 124 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 MAPKAPK5-AS1Q8N8E1 139 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 NAV2Q8IVL1 2488 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 Q6ZQT7 251 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 K7ENP7 123 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 DUX3Q96PT4 197 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 CCL19Q99731 98 aa13.51□□□□□ -0.25
NDFIP1-201ENST00000253814 A0A096LNJ9 63 aa13.5□□□□□ -0.25
NDFIP1-201ENST00000253814 ADARB2-AS1A8MUL3 147 aa13.5□□□□□ -0.25
NDFIP1-201ENST00000253814 SPINK13Q1W4C9 94 aa13.5□□□□□ -0.25
NDFIP1-201ENST00000253814 PIEZO1Q92508 2521 aa13.49□□□□□ -0.25
NDFIP1-201ENST00000253814 RNF185Q96GF1 192 aa13.49□□□□□ -0.25
NDFIP1-201ENST00000253814 ANAPC13Q9BS18 74 aa13.49□□□□□ -0.25
NDFIP1-201ENST00000253814 RPL39P62891 51 aaKnown RBP13.49□□□□□ -0.25
NDFIP1-201ENST00000253814 MEIG1Q5JSS6 88 aa13.49□□□□□ -0.25
NDFIP1-201ENST00000253814 TEX29Q8N6K0 151 aa13.49□□□□□ -0.25
NDFIP1-201ENST00000253814 POLQO75417 2590 aa13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 PTH2Q96A98 100 aa13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 PMVKQ15126 192 aa13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 MSRB2Q9Y3D2 182 aa13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 RNASE13Q5GAN3 156 aaKnown RBP13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 JPT2Q9H910 190 aa13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 HIGD1BQ9P298 99 aa13.48□□□□□ -0.25
NDFIP1-201ENST00000253814 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
NDFIP1-201ENST00000253814 DAZ1Q9NQZ3 744 aaKnown RBP13.47□□□□□ -0.25
NDFIP1-201ENST00000253814 CENPVL3A0A0U1RRI6 287 aa13.47□□□□□ -0.25
NDFIP1-201ENST00000253814 TRBV12-3P01733 135 aa13.46□□□□□ -0.25
NDFIP1-201ENST00000253814 TAL2Q16559 108 aa13.46□□□□□ -0.25
NDFIP1-201ENST00000253814 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.25
NDFIP1-201ENST00000253814 ITLN2Q8WWU7 325 aaPredicted RBP13.46□□□□□ -0.25
NDFIP1-201ENST00000253814 C11orf21Q9P2W6 132 aa13.46□□□□□ -0.25
NDFIP1-201ENST00000253814 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
NDFIP1-201ENST00000253814 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
NDFIP1-201ENST00000253814 LY6LH3BQJ8 138 aa13.45□□□□□ -0.26
NDFIP1-201ENST00000253814 RBAKDNA6NC62 111 aa13.45□□□□□ -0.26
NDFIP1-201ENST00000253814 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
NDFIP1-201ENST00000253814 SYNJ2BPP57105 145 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 PHLDA1Q8WV24 401 aaPredicted RBP13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 ZNF625Q96I27 306 aaPredicted RBP13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 CCDC140Q96MF4 163 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 BLCAPP62952 87 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 U3KQK5 164 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 LINC01587Q99440 93 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 C20orf78Q9BR46 151 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 ADGRG4Q8IZF6 3080 aa13.44□□□□□ -0.26
NDFIP1-201ENST00000253814 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 SPAG8Q99932 426 aaPredicted RBP13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 J3QQQ9 107 aa13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 MAPK1IP1LQ8NDC0 245 aa13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 BAALCQ8WXS3 180 aa13.43□□□□□ -0.26
NDFIP1-201ENST00000253814 TNFRSF13BO14836 293 aaPredicted RBP13.42□□□□□ -0.26
NDFIP1-201ENST00000253814 MRPS12O15235 138 aaKnown RBP13.42□□□□□ -0.26
NDFIP1-201ENST00000253814 TCF15Q12870 199 aa13.42□□□□□ -0.26
NDFIP1-201ENST00000253814 GATD1Q8NB37 220 aa13.42□□□□□ -0.26
NDFIP1-201ENST00000253814 C11orf86A6NJI1 115 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 LGALS1P09382 135 aaKnown RBP13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 GAGE2BQ13066 116 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 USMG5Q96IX5 58 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 PRO1854Q9UHT4 67 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 NDUFA4O00483 81 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 LY6G5BQ8NDX9 201 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 IGHV1-69DA0A0B4J2H0 117 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 IGHV1-69P01742 117 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 ZFAND6Q6FIF0 208 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 TOMM7Q9P0U1 55 aa13.41□□□□□ -0.26
NDFIP1-201ENST00000253814 OPRPNQ99935 248 aaPredicted RBP13.4□□□□□ -0.26
NDFIP1-201ENST00000253814 CFAP47Q6ZTR5 3102 aa13.4□□□□□ -0.26
NDFIP1-201ENST00000253814 PPDPFLQ8WWR9 84 aa13.4□□□□□ -0.26
NDFIP1-201ENST00000253814 GNLYP22749 145 aa13.39□□□□□ -0.27
NDFIP1-201ENST00000253814 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
NDFIP1-201ENST00000253814 TIMM21Q9BVV7 248 aa13.39□□□□□ -0.27
NDFIP1-201ENST00000253814 TMEM262E9PQX1 116 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms