RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 U3KQE9 123 aa7.72□□□□□ -1.17
COPB1-201ENST00000249923 SRSF2Q01130 221 aaKnown RBP7.72□□□□□ -1.17
COPB1-201ENST00000249923 LGALS9BQ3B8N2 356 aa7.72□□□□□ -1.17
COPB1-201ENST00000249923 LGALS9CQ6DKI2 356 aa7.72□□□□□ -1.17
COPB1-201ENST00000249923 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
COPB1-201ENST00000249923 RAX2Q96IS3 184 aa7.72□□□□□ -1.17
COPB1-201ENST00000249923 PRSS2P07478 247 aa7.71□□□□□ -1.17
COPB1-201ENST00000249923 HLA-DRB4P13762 266 aa7.71□□□□□ -1.17
COPB1-201ENST00000249923 TMEM78Q5T7P6 136 aa7.71□□□□□ -1.17
COPB1-201ENST00000249923 UNQ9165/PRO28630Q6UXU0 137 aa7.71□□□□□ -1.17
COPB1-201ENST00000249923 BOD1L2Q8IYS8 172 aa7.71□□□□□ -1.17
COPB1-201ENST00000249923 HLA-DRB4X5D2U9 266 aa7.71□□□□□ -1.17
COPB1-201ENST00000249923 NBPF19A0A087WUL8 3843 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 ZNF815PA8K554 130 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 FABP5P3A8MUU1 101 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 NDUFS8O00217 210 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 NPFFO15130 113 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 KLHL30-AS1Q8NEE0 82 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 PIEZO1Q92508 2521 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 TRAV26-1A0A087WT03 109 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 LINC01549A6NIU2 74 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 SCGB2A1O75556 95 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 NPC2P61916 151 aa7.71□□□□□ -1.18
COPB1-201ENST00000249923 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.18
COPB1-201ENST00000249923 ITLN2Q8WWU7 325 aaPredicted RBP7.71□□□□□ -1.18
COPB1-201ENST00000249923 POLQO75417 2590 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 CCDC168Q8NDH2 2452 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 BRD3OSQ6XYD6 125 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 C16orf92Q96LL3 132 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 HHLA3Q9XRX5 114 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 RBAKDNA6NC62 111 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 IGHV4-39P01824 125 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 MAPKAPK5-AS1Q8N8E1 139 aa7.7□□□□□ -1.18
COPB1-201ENST00000249923 Q6ZS46 218 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 NRACQ8N912 160 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 HOXA3O43365 443 aaPredicted RBP7.69□□□□□ -1.18
COPB1-201ENST00000249923 UCNP55089 124 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
COPB1-201ENST00000249923 ODF1Q14990 250 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
COPB1-201ENST00000249923 IGHV3-11P01762 117 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 C12orf74Q32Q52 190 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 GEMIN7Q9H840 131 aaKnown RBP7.69□□□□□ -1.18
COPB1-201ENST00000249923 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
COPB1-201ENST00000249923 PHLDA3Q9Y5J5 127 aa7.69□□□□□ -1.18
COPB1-201ENST00000249923 EDN2P20800 178 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 CEND1Q8N111 149 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 DPF1Q92782 380 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 IGLL5B9A064 214 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 SOCS3O14543 225 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 C3orf56Q8N813 242 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 ATP6V0BQ99437 205 aa7.68□□□□□ -1.18
COPB1-201ENST00000249923 SLC25A16P16260 332 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 C9orf47Q6ZRZ4 202 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 TRBV7-1A0A0A6YYK4 115 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 IGHV4-61A0A0C4DH41 118 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 A0A0U1RRA0 63 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 EEF1AKMT3Q96AZ1 226 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 LINC00477Q96M19 166 aa7.67□□□□□ -1.18
COPB1-201ENST00000249923 CHTOPQ9Y3Y2 248 aaKnown RBP7.67□□□□□ -1.18
COPB1-201ENST00000249923 TRBV20-1A0A075B6N2 111 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 NXT2Q9NPJ8 142 aaKnown RBP7.66□□□□□ -1.18
COPB1-201ENST00000249923 SS18L2Q9UHA2 77 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 TRAV41A0A0B4J266 112 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 LAGE3Q14657 143 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 ZFP2Q6ZN57 461 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 ZFAND2AQ8N6M9 145 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 MUC4Q99102 2169 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 ATP5LO75964 103 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 RNASE4P34096 147 aaKnown RBP7.66□□□□□ -1.18
COPB1-201ENST00000249923 METTL26Q96S19 204 aa7.66□□□□□ -1.18
COPB1-201ENST00000249923 A0A087WWL8 130 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 GNLYP22749 145 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 RPL39LQ96EH5 51 aaKnown RBP7.65□□□□□ -1.18
COPB1-201ENST00000249923 DOPEY1Q5JWR5 2465 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 TRAV2A0A0B4J234 112 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 ADARB2-AS1A8MUL3 147 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 F6UB75 175 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 CRIP2P52943 208 aaPredicted RBP7.65□□□□□ -1.18
COPB1-201ENST00000249923 ANAPC13Q9BS18 74 aa7.65□□□□□ -1.18
COPB1-201ENST00000249923 IGHV4-4A0A075B6R2 117 aa7.65□□□□□ -1.19
COPB1-201ENST00000249923 PRSS47A8MTI9 375 aa7.65□□□□□ -1.19
COPB1-201ENST00000249923 CRYBA4P53673 196 aa7.65□□□□□ -1.19
COPB1-201ENST00000249923 LY6EQ16553 131 aa7.65□□□□□ -1.19
COPB1-201ENST00000249923 FOXI2Q6ZQN5 318 aa7.65□□□□□ -1.19
COPB1-201ENST00000249923 MOB4Q9Y3A3 225 aa7.65□□□□□ -1.19
COPB1-201ENST00000249923 MYO18BQ8IUG5 2567 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 MRPL53Q96EL3 112 aaKnown RBP7.64□□□□□ -1.19
COPB1-201ENST00000249923 PRADC1Q9BSG0 188 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 IGHV1-69DA0A0B4J2H0 117 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 IGHV1-69P01742 117 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 BLCAPP62952 87 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 Q8N8P6 123 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 NIPBLQ6KC79 2804 aaeCLIP7.64□□□□□ -1.193e-6■■■■□ 24.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms