RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 GAS8-AS1O95177 125 aa15.68■□□□□ 0.1
SNX3-201ENST00000230085 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.68■□□□□ 0.1
SNX3-201ENST00000230085 TEX29Q8N6K0 151 aa15.68■□□□□ 0.1
SNX3-201ENST00000230085 ZNF502Q8TBZ5 544 aa15.68■□□□□ 0.1
SNX3-201ENST00000230085 SPANXB1Q9NS25 103 aaPredicted RBP15.68■□□□□ 0.1
SNX3-201ENST00000230085 CRLF1O75462 422 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 FAM110DQ8TAY7 271 aaPredicted RBP15.67■□□□□ 0.1
SNX3-201ENST00000230085 ATP6V0BQ99437 205 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 LENEPQ9Y5L5 61 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 IGHV7-4-1A0A0J9YVY3 117 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 SRD5A1P18405 259 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 C9orf47Q6ZRZ4 202 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 SPATA25Q9BR10 227 aa15.67■□□□□ 0.1
SNX3-201ENST00000230085 TRBV7-3A0A075B6L6 115 aa15.66■□□□□ 0.1
SNX3-201ENST00000230085 CD300EQ496F6 205 aaPredicted RBP15.66■□□□□ 0.1
SNX3-201ENST00000230085 WFDC3Q8IUB2 231 aa15.66■□□□□ 0.1
SNX3-201ENST00000230085 MRPL35Q9NZE8 188 aaKnown RBP15.66■□□□□ 0.1
SNX3-201ENST00000230085 S4R3C0 116 aa15.66■□□□□ 0.1
SNX3-201ENST00000230085 NPFFO15130 113 aa15.65■□□□□ 0.1
SNX3-201ENST00000230085 SAA4P35542 130 aa15.65■□□□□ 0.1
SNX3-201ENST00000230085 C12orf74Q32Q52 190 aa15.65■□□□□ 0.1
SNX3-201ENST00000230085 SAMD13Q5VXD3 122 aa15.65■□□□□ 0.1
SNX3-201ENST00000230085 GTSCR1Q86UQ5 136 aa15.65■□□□□ 0.1
SNX3-201ENST00000230085 NHP2Q9NX24 153 aaKnown RBP15.65■□□□□ 0.1
SNX3-201ENST00000230085 F8VRH5 84 aa15.64■□□□□ 0.1
SNX3-201ENST00000230085 HLA-DMBP28068 263 aa15.64■□□□□ 0.1
SNX3-201ENST00000230085 ZNF479Q96JC4 524 aa15.64■□□□□ 0.1
SNX3-201ENST00000230085 IGHV7-81A0A0B4J1V7 117 aa15.64■□□□□ 0.09
SNX3-201ENST00000230085 PRAC2D3DTV9 90 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 H7C1H1 209 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 RRN3P1Q2M238 152 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 TM4SF20Q53R12 229 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 AJUBAQ96IF1 538 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 SIGMAR1Q99720 223 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 AGPAT4-IT1Q9H0P7 198 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 C11orf21Q9P2W6 132 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 U3KQE9 123 aa15.63■□□□□ 0.09
SNX3-201ENST00000230085 NCBP2LA6PVI3 153 aaKnown RBP15.62■□□□□ 0.09
SNX3-201ENST00000230085 TCTAP57738 103 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 HES1Q14469 280 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 C9orf139Q6ZV77 190 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 MAPKAPK5-AS1Q8N8E1 139 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 C20orf78Q9BR46 151 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 TTTY13Q9BZ97 58 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 PRO0461Q9UI25 63 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 CLPSL1A2RUU4 121 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 K7ERJ3 54 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 GATA1P15976 413 aaPredicted RBP15.62■□□□□ 0.09
SNX3-201ENST00000230085 RPL24P83731 157 aaKnown RBP15.62■□□□□ 0.09
SNX3-201ENST00000230085 ORMDL2Q53FV1 153 aa15.62■□□□□ 0.09
SNX3-201ENST00000230085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.61■□□□□ 0.09
SNX3-201ENST00000230085 ERCC8Q13216 396 aa15.61■□□□□ 0.09
SNX3-201ENST00000230085 SMIM2Q9BVW6 85 aa15.61■□□□□ 0.09
SNX3-201ENST00000230085 TRGV3P03979 118 aa15.6■□□□□ 0.09
SNX3-201ENST00000230085 MED14OSP0DP75 135 aa15.6■□□□□ 0.09
SNX3-201ENST00000230085 PRB4P10163 310 aaPredicted RBP15.6■□□□□ 0.09
SNX3-201ENST00000230085 DEFB112Q30KQ8 113 aa15.6■□□□□ 0.09
SNX3-201ENST00000230085 TMEM78Q5T7P6 136 aa15.6■□□□□ 0.09
SNX3-201ENST00000230085 Q8N9W7 124 aa15.6■□□□□ 0.09
SNX3-201ENST00000230085 TRAV8-2A0A0B4J237 113 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 M0R381 172 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 ATP6V0E2Q8NHE4 81 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 TOMM6Q96B49 74 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 GAGE12HA6NDE8 117 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 IGFL4Q6B9Z1 124 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 LCNL1Q6ZST4 164 aa15.59■□□□□ 0.09
SNX3-201ENST00000230085 SETD2Q9BYW2 2564 aaPredicted RBP15.59■□□□□ 0.09
SNX3-201ENST00000230085 MYMXA0A1B0GTQ4 84 aa15.58■□□□□ 0.08
SNX3-201ENST00000230085 LINC01549A6NIU2 74 aa15.58■□□□□ 0.08
SNX3-201ENST00000230085 TMEM11P17152 192 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 SCGB2A2Q13296 93 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 NEXN-AS1Q8NBZ9 246 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 OR11H12B2RN74 326 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 AZU1P20160 251 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 C15orf32Q32M92 178 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 OR11H1Q8NG94 326 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 OR11H2Q8NH07 326 aa15.57■□□□□ 0.08
SNX3-201ENST00000230085 TRBV7-1A0A0A6YYK4 115 aa15.56■□□□□ 0.08
SNX3-201ENST00000230085 IGHV3-23P01764 117 aa15.56■□□□□ 0.08
SNX3-201ENST00000230085 RPL32P62910 135 aaKnown RBP15.56■□□□□ 0.08
SNX3-201ENST00000230085 WFDC2Q14508 124 aa15.56■□□□□ 0.08
SNX3-201ENST00000230085 GAGE13Q4V321 117 aa15.56■□□□□ 0.08
SNX3-201ENST00000230085 HIST1H4GQ99525 98 aa15.56■□□□□ 0.08
SNX3-201ENST00000230085 PPP1R17O96001 155 aa15.55■□□□□ 0.08
SNX3-201ENST00000230085 POM121L12Q8N7R1 296 aa15.55■□□□□ 0.08
SNX3-201ENST00000230085 JMJD1CQ15652 2540 aa15.55■□□□□ 0.08
SNX3-201ENST00000230085 C8orf86Q6ZUL3 223 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 CCDC140Q96MF4 163 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 TRBV7-9A0A0J9YWB2 115 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 Q6YL49 198 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 RNF182Q8N6D2 247 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 METTL26Q96S19 204 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 TSSC4Q9Y5U2 329 aaPredicted RBP15.54■□□□□ 0.08
SNX3-201ENST00000230085 AGRNO00468 2067 aa15.54■□□□□ 0.08
SNX3-201ENST00000230085 NF1P21359 2839 aa15.53■□□□□ 0.08
SNX3-201ENST00000230085 PPIFP30405 207 aaKnown RBP15.53■□□□□ 0.08
SNX3-201ENST00000230085 SUMO2P61956 95 aaKnown RBP15.53■□□□□ 0.08
SNX3-201ENST00000230085 SPANXN1Q5VSR9 72 aa15.53■□□□□ 0.08
SNX3-201ENST00000230085 DUX5Q96PT3 197 aa15.53■□□□□ 0.08
SNX3-201ENST00000230085 SPAG8Q99932 426 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms