RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 OR2K2Q8NGT1 345 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 SCRT2Q9NQ03 307 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 PPP1R17O96001 155 aa12.67□□□□□ -0.38
GAPDH-201ENST00000229239 EVI2AP22794 236 aa12.67□□□□□ -0.38
GAPDH-201ENST00000229239 LEPP41159 167 aa12.67□□□□□ -0.38
GAPDH-201ENST00000229239 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
GAPDH-201ENST00000229239 PMCHL2Q9BQD1 86 aa12.67□□□□□ -0.38
GAPDH-201ENST00000229239 IGKV3-7A0A075B6H7 116 aa12.66□□□□□ -0.38
GAPDH-201ENST00000229239 H3BVH4 76 aa12.66□□□□□ -0.38
GAPDH-201ENST00000229239 SRD5A1P18405 259 aa12.66□□□□□ -0.38
GAPDH-201ENST00000229239 LINC00469Q8N7U9 141 aa12.66□□□□□ -0.38
GAPDH-201ENST00000229239 K7EMI3 77 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 RNASE4P34096 147 aaKnown RBP12.65□□□□□ -0.38
GAPDH-201ENST00000229239 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 F6UB75 175 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 ANXA2RQ3ZCQ2 193 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 OR1N2Q8NGR9 330 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
GAPDH-201ENST00000229239 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
GAPDH-201ENST00000229239 K7EQG2 157 aa12.64□□□□□ -0.39
GAPDH-201ENST00000229239 DUSP14O95147 198 aaKnown RBP12.64□□□□□ -0.39
GAPDH-201ENST00000229239 Q6ZQT7 251 aa12.64□□□□□ -0.39
GAPDH-201ENST00000229239 GOLT1BQ9Y3E0 138 aa12.64□□□□□ -0.39
GAPDH-201ENST00000229239 IGHV4OR15-8A0A075B7B6 117 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 A0A087WW49 117 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 M0R381 172 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 EDN2P20800 178 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 C20orf78Q9BR46 151 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 J3KRW8 73 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 NXPH4O95158 308 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 HOXD3P31249 432 aaPredicted RBP12.63□□□□□ -0.39
GAPDH-201ENST00000229239 SYNJ2BPP57105 145 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 DEFB1P60022 68 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 NRACQ8N912 160 aa12.63□□□□□ -0.39
GAPDH-201ENST00000229239 IGLV2-18A0A075B6J9 118 aa12.62□□□□□ -0.39
GAPDH-201ENST00000229239 ATP5LO75964 103 aa12.62□□□□□ -0.39
GAPDH-201ENST00000229239 FAM159AQ6UWV7 190 aa12.62□□□□□ -0.39
GAPDH-201ENST00000229239 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
GAPDH-201ENST00000229239 MDFIQ99750 246 aa12.62□□□□□ -0.39
GAPDH-201ENST00000229239 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 H0Y8G0 127 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 WFDC3Q8IUB2 231 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 WFDC12Q8WWY7 111 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 A0A0J9YX75 114 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 TCAPO15273 167 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 GAS8-AS1O95177 125 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 LAGE3Q14657 143 aa12.61□□□□□ -0.39
GAPDH-201ENST00000229239 C7orf71A4D174 169 aa12.6□□□□□ -0.39
GAPDH-201ENST00000229239 POM121L12Q8N7R1 296 aa12.6□□□□□ -0.39
GAPDH-201ENST00000229239 ZNF688P0C7X2 276 aa12.59□□□□□ -0.39
GAPDH-201ENST00000229239 RNASE3P12724 160 aaKnown RBP12.59□□□□□ -0.39
GAPDH-201ENST00000229239 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
GAPDH-201ENST00000229239 COX8AP10176 69 aa12.59□□□□□ -0.39
GAPDH-201ENST00000229239 GATA1P15976 413 aaPredicted RBP12.59□□□□□ -0.39
GAPDH-201ENST00000229239 BATFQ16520 125 aa12.59□□□□□ -0.39
GAPDH-201ENST00000229239 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
GAPDH-201ENST00000229239 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
GAPDH-201ENST00000229239 G0S2P27469 103 aa12.58□□□□□ -0.4
GAPDH-201ENST00000229239 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
GAPDH-201ENST00000229239 ORMDL2Q53FV1 153 aa12.58□□□□□ -0.4
GAPDH-201ENST00000229239 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
GAPDH-201ENST00000229239 LINC01549A6NIU2 74 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 LINC01619G3V211 115 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 GNRH2O43555 120 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
GAPDH-201ENST00000229239 SMIM17P0DL12 118 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 CDKN1BP46527 198 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 TFPI2P48307 235 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 RPL32P62910 135 aaKnown RBP12.57□□□□□ -0.4
GAPDH-201ENST00000229239 TMEM158Q8WZ71 300 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 STAB1Q9NY15 2570 aa12.57□□□□□ -0.4
GAPDH-201ENST00000229239 SUMO2P61956 95 aaKnown RBP12.56□□□□□ -0.4
GAPDH-201ENST00000229239 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
GAPDH-201ENST00000229239 TRAV26-2A0A0B4J265 109 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 FXYD7P58549 80 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 GAGE1Q13065 139 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 SELENOKQ9Y6D0 94 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 DLEU1O43261 78 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
GAPDH-201ENST00000229239 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 ZMAT4Q9H898 229 aa12.55□□□□□ -0.4
GAPDH-201ENST00000229239 SIVA1O15304 175 aa12.54□□□□□ -0.4
GAPDH-201ENST00000229239 PRSS1P07477 247 aa12.54□□□□□ -0.4
GAPDH-201ENST00000229239 TRAV12-3A0A0B4J271 114 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 CD7P09564 240 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 RASL10AQ92737 203 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 NUDT3O95989 172 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-201ENST00000229239 ADAMTSL5Q6ZMM2 481 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 STPG4Q8N801 248 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 OR9G4Q8NGQ1 327 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 DUX5Q96PT3 197 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
GAPDH-201ENST00000229239 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms