RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ZNF503Q96F45 646 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 FAM236DA0A1B0GTK5 79 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 DEFB130BP0DP73 79 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 DEFB130AP0DP74 79 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 LOXP28300 417 aaPredicted RBP8.16□□□□□ -1.1
VCL-201ENST00000211998 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 PROK2Q9HC23 129 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 ABCA1O95477 2261 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 TOMM6Q96B49 74 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 TM2D2Q9BX73 214 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.16□□□□□ -1.1
VCL-201ENST00000211998 IGKV2-29A2NJV5 120 aaPredicted RBP8.16□□□□□ -1.1
VCL-201ENST00000211998 DIAPH2-AS1Q14236 149 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 Q96MF0 132 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
VCL-201ENST00000211998 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
VCL-201ENST00000211998 ZNF503-AS2A6NEH8 195 aa8.15□□□□□ -1.11
VCL-201ENST00000211998 C11orf86A6NJI1 115 aa8.15□□□□□ -1.11
VCL-201ENST00000211998 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.11
VCL-201ENST00000211998 IGLV3-9A0A075B6K5 115 aa8.15□□□□□ -1.11
VCL-201ENST00000211998 PLA2G5P39877 138 aa8.15□□□□□ -1.11
VCL-201ENST00000211998 GVINP1Q7Z2Y8 2422 aa8.15□□□□□ -1.11
VCL-201ENST00000211998 SLC25A29Q8N8R3 303 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 A0A1B0GXF2 115 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 J3QKU1 62 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 APOC4P55056 127 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 RPL39P62891 51 aaKnown RBP8.14□□□□□ -1.11
VCL-201ENST00000211998 CFHR3Q02985 330 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 RNF152Q8N8N0 203 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 XGP55808 180 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
VCL-201ENST00000211998 G3V318 75 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 H3BUA1 57 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 C8orf31Q8N9H6 132 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 CNOT1A5YKK6 2376 aaKnown RBP8.13□□□□□ -1.11
VCL-201ENST00000211998 MYO7BQ6PIF6 2116 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 XCL2Q9UBD3 114 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 YLPM1P49750 1951 aaKnown RBP8.13□□□□□ -1.11
VCL-201ENST00000211998 NCOR1O75376 2440 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 LECT2O14960 151 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 ELANEP08246 267 aa8.13□□□□□ -1.11
VCL-201ENST00000211998 TCF20Q9UGU0 1960 aaKnown RBP8.12□□□□□ -1.11
VCL-201ENST00000211998 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 F5H768 121 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 C14orf132Q9NPU4 83 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 EP300Q09472 2414 aaPredicted RBP8.12□□□□□ -1.11
VCL-201ENST00000211998 RLFQ13129 1914 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 TRAV4A0A0B4J268 109 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 C19orf71A6NCJ1 209 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 JMJD7-PLA2G4BH0Y9G9 81 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 PIP4P1Q86T03 277 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 WFDC11Q8NEX6 87 aa8.12□□□□□ -1.11
VCL-201ENST00000211998 KMT2EQ8IZD2 1858 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 Q9HAA7 133 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 INSL3P51460 131 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 FAM215AQ9Y5M1 114 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 IGLV2-8P01709 118 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 ODF3L1Q8IXM7 274 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 LRRC75A-AS1Q8N1F1 130 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 COL4A6Q14031 1691 aa8.11□□□□□ -1.11
VCL-201ENST00000211998 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 RMI2Q96E14 147 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
VCL-201ENST00000211998 TICRRQ7Z2Z1 1910 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 MGAMO43451 1857 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 ARFGEF3Q5TH69 2177 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
VCL-201ENST00000211998 FGF23Q9GZV9 251 aaPredicted RBP8.1□□□□□ -1.11
VCL-201ENST00000211998 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 PLXNA4Q9HCM2 1894 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 WDR81Q562E7 1941 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 IGKV1OR2-108A0A075B7D4 117 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 IGHV7-4-1A0A0J9YVY3 117 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 CLPSL1A2RUU4 121 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 MP68P56378 58 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 DEFB105AQ8NG35 78 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
VCL-201ENST00000211998 LENEPQ9Y5L5 61 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 WNK2Q9Y3S1 2297 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 NREPQ16612 68 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 TIMM17AQ99595 171 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 POLEQ07864 2286 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 MAPKAPK5-AS1Q8N8E1 139 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 ACACAQ13085 2346 aa8.09□□□□□ -1.11
VCL-201ENST00000211998 ARHGAP21Q5T5U3 1957 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms