RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 CACNA1AO00555 2505 aa12.99□□□□□ -0.33
CLDN11-201ENST00000064724 NRGNQ92686 78 aa12.98□□□□□ -0.33
CLDN11-201ENST00000064724 KIF25-AS1Q9Y6Z4 181 aa12.98□□□□□ -0.33
CLDN11-201ENST00000064724 J3QLI3 93 aa12.98□□□□□ -0.33
CLDN11-201ENST00000064724 TTTY13Q9BZ97 58 aa12.98□□□□□ -0.33
CLDN11-201ENST00000064724 SELENOKQ9Y6D0 94 aa12.98□□□□□ -0.33
CLDN11-201ENST00000064724 TRBV25-1A0A075B6N4 114 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 H7C1H1 209 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 LINC00315P59091 139 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 IGHV4OR15-8A0A075B7B6 117 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 A0A087WW49 117 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 F8VRH5 84 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 MGPP08493 103 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 ODF3Q96PU9 254 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 SCGB3A1Q96QR1 104 aa12.97□□□□□ -0.33
CLDN11-201ENST00000064724 RPL32P62910 135 aaKnown RBP12.96□□□□□ -0.33
CLDN11-201ENST00000064724 FAM159AQ6UWV7 190 aa12.96□□□□□ -0.33
CLDN11-201ENST00000064724 NEXN-AS1Q8NBZ9 246 aa12.96□□□□□ -0.33
CLDN11-201ENST00000064724 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.33
CLDN11-201ENST00000064724 RBX1P62877 108 aa12.96□□□□□ -0.34
CLDN11-201ENST00000064724 UFSP1Q6NVU6 142 aa12.96□□□□□ -0.34
CLDN11-201ENST00000064724 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.34
CLDN11-201ENST00000064724 C10orf99Q6UWK7 81 aa12.96□□□□□ -0.34
CLDN11-201ENST00000064724 USP9XQ93008 2570 aaPredicted RBP12.95□□□□□ -0.34
CLDN11-201ENST00000064724 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
CLDN11-201ENST00000064724 GAGE10A6NGK3 116 aa12.94□□□□□ -0.34
CLDN11-201ENST00000064724 H3BUT2 72 aa12.94□□□□□ -0.34
CLDN11-201ENST00000064724 C2orf66Q6UXQ4 117 aa12.94□□□□□ -0.34
CLDN11-201ENST00000064724 CSTL1Q9H114 145 aa12.94□□□□□ -0.34
CLDN11-201ENST00000064724 CELSR2Q9HCU4 2923 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 GTF2H5Q6ZYL4 71 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 MAPKAPK5-AS1Q8N8E1 139 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 CST9LQ9H4G1 147 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
CLDN11-201ENST00000064724 FLNCQ14315 2725 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 GAGE12BA1L429 117 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 FXYD2P54710 66 aa12.93□□□□□ -0.34
CLDN11-201ENST00000064724 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
CLDN11-201ENST00000064724 A0A0J9YX75 114 aa12.92□□□□□ -0.34
CLDN11-201ENST00000064724 K7EQG2 157 aa12.92□□□□□ -0.34
CLDN11-201ENST00000064724 TGFAP01135 160 aa12.92□□□□□ -0.34
CLDN11-201ENST00000064724 GCSHP23434 173 aa12.92□□□□□ -0.34
CLDN11-201ENST00000064724 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
CLDN11-201ENST00000064724 LGALS9O00182 355 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 CD7P09564 240 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 SMIM13P0DJ93 91 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
CLDN11-201ENST00000064724 BAALCQ8WXS3 180 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 K7EP34 96 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 FSHBP01225 129 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 POLR2KP53803 58 aaKnown RBP12.91□□□□□ -0.34
CLDN11-201ENST00000064724 TAL2Q16559 108 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 C9orf85Q96MD7 179 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 MUC4Q99102 2169 aa12.91□□□□□ -0.34
CLDN11-201ENST00000064724 LINC01549A6NIU2 74 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 ELANEP08246 267 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
CLDN11-201ENST00000064724 CDKN1BP46527 198 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 CEND1Q8N111 149 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 WFDC12Q8WWY7 111 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 RAB37Q96AX2 223 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 IGHV3-16A0A0C4DH30 117 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 A0A1W2PPM0 123 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 JPT2Q9H910 190 aa12.9□□□□□ -0.34
CLDN11-201ENST00000064724 OCIAD2Q56VL3 154 aa12.89□□□□□ -0.35
CLDN11-201ENST00000064724 SUMO4Q6EEV6 95 aa12.89□□□□□ -0.35
CLDN11-201ENST00000064724 Q6YL49 198 aa12.89□□□□□ -0.35
CLDN11-201ENST00000064724 PRSS29PA6NIE9 313 aa12.88□□□□□ -0.35
CLDN11-201ENST00000064724 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
CLDN11-201ENST00000064724 PHLDA1Q8WV24 401 aaPredicted RBP12.88□□□□□ -0.35
CLDN11-201ENST00000064724 NAA38Q9BRA0 125 aaKnown RBP12.88□□□□□ -0.35
CLDN11-201ENST00000064724 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
CLDN11-201ENST00000064724 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
CLDN11-201ENST00000064724 UBE2E2Q96LR5 201 aa12.88□□□□□ -0.35
CLDN11-201ENST00000064724 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
CLDN11-201ENST00000064724 LINC01619G3V211 115 aa12.87□□□□□ -0.35
CLDN11-201ENST00000064724 VCYO14598 125 aa12.87□□□□□ -0.35
CLDN11-201ENST00000064724 MAPK1IP1LQ8NDC0 245 aa12.87□□□□□ -0.35
CLDN11-201ENST00000064724 CYSLTR1Q9Y271 337 aa12.87□□□□□ -0.35
CLDN11-201ENST00000064724 TRBV6-5A0A0K0K1A5 114 aa12.87□□□□□ -0.35
CLDN11-201ENST00000064724 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
CLDN11-201ENST00000064724 A0A087WWL8 130 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 IGIPA6NJ69 53 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 OR11H12B2RN74 326 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 SAMD5Q5TGI4 173 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 OR11H1Q8NG94 326 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 OR11H2Q8NH07 326 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 MDFICQ9P1T7 246 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 TRAV12-2A0A075B6T6 113 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 MYMXA0A1B0GTQ4 84 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 E9PLD3 99 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
CLDN11-201ENST00000064724 COX6B1P14854 86 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 HOXD3P31249 432 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms