RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ASCL2Q99929 193 aa16.47■□□□□ 0.23
HOXC8-201ENST00000040584 IGLC6P0CF74 106 aa16.46■□□□□ 0.23
HOXC8-201ENST00000040584 ZNF138P52744 262 aa16.46■□□□□ 0.23
HOXC8-201ENST00000040584 VGLL1Q99990 258 aa16.46■□□□□ 0.23
HOXC8-201ENST00000040584 GOLT1BQ9Y3E0 138 aa16.46■□□□□ 0.23
HOXC8-201ENST00000040584 VWFP04275 2813 aa16.46■□□□□ 0.23
HOXC8-201ENST00000040584 K7EQG2 157 aa16.46■□□□□ 0.22
HOXC8-201ENST00000040584 LINC00173Q6ZV60 143 aa16.46■□□□□ 0.22
HOXC8-201ENST00000040584 SPATA3Q8NHX4 192 aa16.46■□□□□ 0.22
HOXC8-201ENST00000040584 CNFNQ9BYD5 112 aa16.46■□□□□ 0.22
HOXC8-201ENST00000040584 D6R8Y8 96 aa16.45■□□□□ 0.22
HOXC8-201ENST00000040584 PPBPP02775 128 aa16.45■□□□□ 0.22
HOXC8-201ENST00000040584 ZNF738Q8NE65 137 aa16.45■□□□□ 0.22
HOXC8-201ENST00000040584 TMSB15BA0A087X1C1 80 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 ID1P41134 155 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 STPG4Q8N801 248 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 ZNF688P0C7X2 276 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 DEFB1P60022 68 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 TWIST1Q15672 202 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 LINC01559Q495D7 138 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 SLC25A34Q6PIV7 304 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 PMCHL2Q9BQD1 86 aa16.44■□□□□ 0.22
HOXC8-201ENST00000040584 STAB1Q9NY15 2570 aa16.43■□□□□ 0.22
HOXC8-201ENST00000040584 HIST1H1AQ02539 215 aaPredicted RBP16.43■□□□□ 0.22
HOXC8-201ENST00000040584 MRPL51Q4U2R6 128 aaKnown RBP16.43■□□□□ 0.22
HOXC8-201ENST00000040584 COL6A5A8TX70 2615 aa16.43■□□□□ 0.22
HOXC8-201ENST00000040584 AMN1Q8IY45 258 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 ORAOV1Q8WV07 137 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 PPP1R14DQ9NXH3 145 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 TRRAPQ9Y4A5 3859 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 ORM1P02763 201 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 CKS2P33552 79 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 IFI27P40305 119 aaPredicted RBP16.42■□□□□ 0.22
HOXC8-201ENST00000040584 ZNF80P51504 273 aaPredicted RBP16.42■□□□□ 0.22
HOXC8-201ENST00000040584 ERCC8Q13216 396 aa16.42■□□□□ 0.22
HOXC8-201ENST00000040584 SNRPD3P62318 126 aaKnown RBP16.41■□□□□ 0.22
HOXC8-201ENST00000040584 PSMG4Q5JS54 123 aa16.41■□□□□ 0.22
HOXC8-201ENST00000040584 SHISA2Q6UWI4 295 aa16.41■□□□□ 0.22
HOXC8-201ENST00000040584 Q8TAT8 98 aa16.41■□□□□ 0.22
HOXC8-201ENST00000040584 TRAV25A0A0B4J276 109 aa16.4■□□□□ 0.22
HOXC8-201ENST00000040584 IGLV1-51P01701 117 aa16.4■□□□□ 0.22
HOXC8-201ENST00000040584 SORL1Q92673 2214 aa16.4■□□□□ 0.22
HOXC8-201ENST00000040584 TRAV2A0A0B4J234 112 aa16.39■□□□□ 0.22
HOXC8-201ENST00000040584 F6UB75 175 aa16.39■□□□□ 0.22
HOXC8-201ENST00000040584 HINT1P49773 126 aaPredicted RBP16.39■□□□□ 0.22
HOXC8-201ENST00000040584 C9orf47Q6ZRZ4 202 aa16.39■□□□□ 0.22
HOXC8-201ENST00000040584 SCRT2Q9NQ03 307 aa16.39■□□□□ 0.22
HOXC8-201ENST00000040584 SPAG8Q99932 426 aaPredicted RBP16.39■□□□□ 0.21
HOXC8-201ENST00000040584 AGPAT4-IT1Q9H0P7 198 aa16.39■□□□□ 0.21
HOXC8-201ENST00000040584 hDV102S1A0JD36 115 aa16.38■□□□□ 0.21
HOXC8-201ENST00000040584 HBDP02042 147 aa16.38■□□□□ 0.21
HOXC8-201ENST00000040584 TMEM78Q5T7P6 136 aa16.38■□□□□ 0.21
HOXC8-201ENST00000040584 ZNF256Q9Y2P7 627 aaPredicted RBP16.38■□□□□ 0.21
HOXC8-201ENST00000040584 LGALS9BQ3B8N2 356 aa16.37■□□□□ 0.21
HOXC8-201ENST00000040584 LGALS9CQ6DKI2 356 aa16.37■□□□□ 0.21
HOXC8-201ENST00000040584 LENEPQ9Y5L5 61 aa16.37■□□□□ 0.21
HOXC8-201ENST00000040584 LOC389332A0A1B0GUA5 103 aa16.36■□□□□ 0.21
HOXC8-201ENST00000040584 LINC01546A6NGU7 62 aa16.36■□□□□ 0.21
HOXC8-201ENST00000040584 OR8A1Q8NGG7 326 aa16.36■□□□□ 0.21
HOXC8-201ENST00000040584 OR10J6PQ8NGY7 276 aa16.36■□□□□ 0.21
HOXC8-201ENST00000040584 MAP1LC3AQ9H492 121 aa16.36■□□□□ 0.21
HOXC8-201ENST00000040584 ZNF575Q86XF7 245 aa16.35■□□□□ 0.21
HOXC8-201ENST00000040584 DEFB131AP59861 70 aa16.35■□□□□ 0.21
HOXC8-201ENST00000040584 NXT2Q9NPJ8 142 aaKnown RBP16.35■□□□□ 0.21
HOXC8-201ENST00000040584 TIMM8BQ9Y5J9 83 aaPredicted RBP16.35■□□□□ 0.21
HOXC8-201ENST00000040584 A0A096LNJ9 63 aa16.34■□□□□ 0.21
HOXC8-201ENST00000040584 SMIM15Q7Z3B0 74 aa16.34■□□□□ 0.21
HOXC8-201ENST00000040584 WFDC9Q8NEX5 89 aa16.34■□□□□ 0.21
HOXC8-201ENST00000040584 OR2K2Q8NGT1 345 aa16.34■□□□□ 0.21
HOXC8-201ENST00000040584 COX11Q9Y6N1 276 aa16.34■□□□□ 0.21
HOXC8-201ENST00000040584 H0Y8G0 127 aa16.33■□□□□ 0.21
HOXC8-201ENST00000040584 COX8AP10176 69 aa16.33■□□□□ 0.21
HOXC8-201ENST00000040584 LINC00477Q96M19 166 aa16.33■□□□□ 0.21
HOXC8-201ENST00000040584 NOTCH3Q9UM47 2321 aa16.33■□□□□ 0.21
HOXC8-201ENST00000040584 NPSP0C0P6 89 aa16.33■□□□□ 0.2
HOXC8-201ENST00000040584 C9orf66Q5T8R8 295 aa16.33■□□□□ 0.2
HOXC8-201ENST00000040584 RNF185Q96GF1 192 aa16.33■□□□□ 0.2
HOXC8-201ENST00000040584 MAP6D1Q9H9H5 199 aa16.33■□□□□ 0.2
HOXC8-201ENST00000040584 NPYP01303 97 aa16.32■□□□□ 0.2
HOXC8-201ENST00000040584 INSL3P51460 131 aa16.31■□□□□ 0.2
HOXC8-201ENST00000040584 CACNG7P62955 275 aa16.31■□□□□ 0.2
HOXC8-201ENST00000040584 MDFIQ99750 246 aa16.31■□□□□ 0.2
HOXC8-201ENST00000040584 A0A0J9YX75 114 aa16.31■□□□□ 0.2
HOXC8-201ENST00000040584 IFI27L1Q96BM0 104 aa16.31■□□□□ 0.2
HOXC8-201ENST00000040584 MUC21A0A0G2JKD1 596 aa16.3■□□□□ 0.2
HOXC8-201ENST00000040584 MUC21A0A140T8X8 626 aa16.3■□□□□ 0.2
HOXC8-201ENST00000040584 ODF3L2Q3SX64 289 aa16.3■□□□□ 0.2
HOXC8-201ENST00000040584 MUC21Q5SSG8 566 aa16.3■□□□□ 0.2
HOXC8-201ENST00000040584 APRG1Q8IVJ8 170 aa16.3■□□□□ 0.2
HOXC8-201ENST00000040584 IGHV4-4A0A075B6R2 117 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 KNCNA6PVL3 124 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 FOXI2Q6ZQN5 318 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 FAM19A4Q96LR4 140 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 IGKV3D-20A0A0C4DH25 116 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 PRSS47A8MTI9 375 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 NUDT3O95989 172 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 MPV17L2Q567V2 206 aa16.29■□□□□ 0.2
HOXC8-201ENST00000040584 MCRIP2Q9BUT9 160 aaKnown RBP16.29■□□□□ 0.2
HOXC8-201ENST00000040584 TNFRSF6BO95407 300 aa16.28■□□□□ 0.2
HOXC8-201ENST00000040584 IGKV3-20P01619 116 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms