RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FSTL3O95633 263 aa4.84□□□□□ -1.63
VPS13D-201ENST00000011700 FLVCR1-AS1Q8TAF5 88 aa4.84□□□□□ -1.63
VPS13D-201ENST00000011700 TRAV26-1A0A087WT03 109 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 TFF2Q03403 129 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 LCNL1Q6ZST4 164 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 VOPP1Q96AW1 172 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 VPREB3Q9UKI3 123 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 ICOSQ9Y6W8 199 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 PSMB8P28062 276 aa4.84□□□□□ -1.64
VPS13D-201ENST00000011700 F5H768 121 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 LTBRP36941 435 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 C12orf74Q32Q52 190 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 IGKV1D-17A0A075B6S4 117 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 C11orf86A6NJI1 115 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 LYPD3O95274 346 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 SRSF3P84103 164 aaKnown RBP4.83□□□□□ -1.64
VPS13D-201ENST00000011700 MUSTN1Q8IVN3 82 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 CD177Q8N6Q3 437 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 IGKV1-27A0A075B6S5 117 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 MRPL35Q9NZE8 188 aaKnown RBP4.83□□□□□ -1.64
VPS13D-201ENST00000011700 DKK4Q9UBT3 224 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 COX7A2LO14548 114 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 IGKV1-16P04430 117 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 SS18L2Q9UHA2 77 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 IGKV1D-43A0A0B4J1Z2 117 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 IGHV3-23P01764 117 aa4.83□□□□□ -1.64
VPS13D-201ENST00000011700 C9orf66Q5T8R8 295 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 C15orf53Q8NAA6 179 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 SPTSSBQ8NFR3 76 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 FXYD5Q96DB9 178 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 IGLV3-9A0A075B6K5 115 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
VPS13D-201ENST00000011700 CTRLP40313 264 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 C5orf24Q7Z6I8 188 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 NPBQ8NG41 125 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 GFI1Q99684 422 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 NDUFA1O15239 70 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 K7EMT4 169 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 PRSS57Q6UWY2 283 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 IGLL5B9A064 214 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 ZNF747Q9BV97 191 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 IGLV1-44P01699 117 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 CCL18P55774 89 aa4.82□□□□□ -1.64
VPS13D-201ENST00000011700 IGKV1-12A0A0C4DH73 117 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 SMIM9A6NGZ8 99 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 IGKV1D-12P01611 117 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 ZNF503Q96F45 646 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 TRBV12-3P01733 135 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 K7EQD1 137 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 FGFBP3Q8TAT2 258 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 A0A0G2JNJ9 132 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 A6NNC1 897 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 COX17Q14061 63 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 Q9UFV3 132 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 NDUFS7O75251 213 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 UBE2E2Q96LR5 201 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 E9PLD3 99 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 SND1-IT1Q9HBX3 110 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 A0A087WWL8 130 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 NDUFS5O43920 106 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 IGLL1P15814 213 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 COL4A1P02462 1669 aa4.81□□□□□ -1.64
VPS13D-201ENST00000011700 TRAV4A0A0B4J268 109 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 DEFB130BP0DP73 79 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 DEFB130AP0DP74 79 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 DYNAPQ8N1N2 210 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 COX7B2Q8TF08 81 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 TOMM6Q96B49 74 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 LINC00479Q96M42 142 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 LGALS9O00182 355 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 IGLC1P0CG04 106 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 BUB3O43684 328 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 OVOL3O00110 214 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 MORN5Q5VZ52 161 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 FAM236AA0A1B0GUQ0 79 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 FAM236BA0A1B0GV22 79 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 CDKN1AP38936 164 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 Q9H8V8 135 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 TIMM17BO60830 172 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 CGB7P0DN87 165 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 Q8TAT8 98 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 PFN2P35080 140 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 WFDC9Q8NEX5 89 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
VPS13D-201ENST00000011700 A0A1W2PRX2 142 aa4.79□□□□□ -1.64
VPS13D-201ENST00000011700 ATP6V0E1O15342 81 aa4.79□□□□□ -1.64
VPS13D-201ENST00000011700 TMEM263Q8WUH6 116 aaKnown RBP4.79□□□□□ -1.64
VPS13D-201ENST00000011700 ZNF837Q96EG3 531 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-201ENST00000011700 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
VPS13D-201ENST00000011700 HIST2H2BCQ6DN03 193 aa4.79□□□□□ -1.64
VPS13D-201ENST00000011700 HIST2H2BDQ6DRA6 164 aa4.79□□□□□ -1.64
VPS13D-201ENST00000011700 C20orf173Q96LM9 149 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms