RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 SLAQ13239 276 aa13.09□□□□□ -0.31
TRAPPC6A-201ENST00000006275 COX8CQ7Z4L0 72 aa13.09□□□□□ -0.31
TRAPPC6A-201ENST00000006275 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
TRAPPC6A-201ENST00000006275 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 IGKV3D-20A0A0C4DH25 116 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 TRGV4A0A0C4DH28 118 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 C9JCJ5 164 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 PAX4O43316 350 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ORM1P02763 201 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 CRIP1P50238 77 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 NKX2-5P52952 324 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 FHL2Q14192 279 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 C9orf85Q96MD7 179 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 PRO0255Q9UI72 69 aa13.08□□□□□ -0.32
TRAPPC6A-201ENST00000006275 SH2D1AO60880 128 aa13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 S100A4P26447 101 aaKnown RBP13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 KRTAP10-2P60368 255 aa13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 OR4C5Q8NGB2 326 aa13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 TXNDC17Q9BRA2 123 aa13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 HHLA3Q9XRX5 114 aa13.07□□□□□ -0.32
TRAPPC6A-201ENST00000006275 B4DEV8 164 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 IFNA1P01562 189 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ASIPP42127 132 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 CRYBA4P53673 196 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ZNF674Q2M3X9 581 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ZNF876PQ49A33 203 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ALKAL2Q6UX46 152 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 NHLRC2Q8NBF2 726 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 LINC00588Q9Y4M8 146 aa13.06□□□□□ -0.32
TRAPPC6A-201ENST00000006275 A0A096LPF7 62 aa13.05□□□□□ -0.32
TRAPPC6A-201ENST00000006275 M0R036 132 aa13.05□□□□□ -0.32
TRAPPC6A-201ENST00000006275 KRBOX1C9JBD0 128 aa13.04□□□□□ -0.32
TRAPPC6A-201ENST00000006275 C11orf52Q96A22 123 aa13.04□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
TRAPPC6A-201ENST00000006275 PGPEP1LA6NFU8 196 aa13.03□□□□□ -0.32
TRAPPC6A-201ENST00000006275 ZNF506Q5JVG8 444 aa13.03□□□□□ -0.32
TRAPPC6A-201ENST00000006275 PTH2Q96A98 100 aa13.03□□□□□ -0.32
TRAPPC6A-201ENST00000006275 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
TRAPPC6A-201ENST00000006275 BCL2P10415 239 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 BLOC1S1P78537 153 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 MEF2BQ02080 365 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 ESRGQ1W209 222 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 LINC01559Q495D7 138 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 DERL1Q9BUN8 251 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 MLST8Q9BVC4 326 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 IL36BQ9NZH7 164 aa13.02□□□□□ -0.33
TRAPPC6A-201ENST00000006275 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 GRIFINA4D1Z8 144 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 H3BVH4 76 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 RS1O15537 224 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 PDE6DO43924 150 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 MRPL23Q16540 153 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 PCNPQ8WW12 178 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 Q9H8V8 135 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 VAX2Q9UIW0 290 aa13.01□□□□□ -0.33
TRAPPC6A-201ENST00000006275 FLG2Q5D862 2391 aaPredicted RBP13□□□□□ -0.33
TRAPPC6A-201ENST00000006275 CIDEAO60543 219 aa13□□□□□ -0.33
TRAPPC6A-201ENST00000006275 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
TRAPPC6A-201ENST00000006275 TAGLN2P37802 199 aaKnown RBP13□□□□□ -0.33
TRAPPC6A-201ENST00000006275 CFAP126Q5VTH2 177 aa13□□□□□ -0.33
TRAPPC6A-201ENST00000006275 KRTAP1-5Q9BYS1 174 aa13□□□□□ -0.33
TRAPPC6A-201ENST00000006275 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
TRAPPC6A-201ENST00000006275 GYPEP15421 78 aa12.99□□□□□ -0.33
TRAPPC6A-201ENST00000006275 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
TRAPPC6A-201ENST00000006275 MED9Q9NWA0 146 aa12.99□□□□□ -0.33
TRAPPC6A-201ENST00000006275 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 K7EQD1 137 aa12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 GATA1P15976 413 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 SRIP30626 198 aa12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 NEGR1Q7Z3B1 354 aa12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 UPK3BQ9BT76 320 aa12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 MRPS16Q9Y3D3 137 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6A-201ENST00000006275 A8MWV9 139 aa12.97□□□□□ -0.33
TRAPPC6A-201ENST00000006275 CENPWQ5EE01 88 aa12.97□□□□□ -0.33
TRAPPC6A-201ENST00000006275 PIK3CD-AS1Q5SR53 167 aa12.97□□□□□ -0.33
TRAPPC6A-201ENST00000006275 SYT8Q8NBV8 401 aa12.97□□□□□ -0.33
TRAPPC6A-201ENST00000006275 PHLDA3Q9Y5J5 127 aa12.97□□□□□ -0.33
TRAPPC6A-201ENST00000006275 RAB19A4D1S5 217 aa12.96□□□□□ -0.33
TRAPPC6A-201ENST00000006275 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6A-201ENST00000006275 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6A-201ENST00000006275 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
TRAPPC6A-201ENST00000006275 LOC100131303A0A0U1RQF7 123 aa12.95□□□□□ -0.34
TRAPPC6A-201ENST00000006275 GNG4P50150 75 aa12.95□□□□□ -0.34
TRAPPC6A-201ENST00000006275 Q5VSD8 79 aa12.95□□□□□ -0.34
TRAPPC6A-201ENST00000006275 LYPD6BQ8NI32 183 aa12.95□□□□□ -0.34
TRAPPC6A-201ENST00000006275 PRADC1Q9BSG0 188 aa12.95□□□□□ -0.34
TRAPPC6A-201ENST00000006275 PARLQ9H300 379 aa12.95□□□□□ -0.34
TRAPPC6A-201ENST00000006275 IGLV2-8P01709 118 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 CXCL1P09341 107 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 RHOHQ15669 191 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 LYPD5Q6UWN5 251 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SLC25A29Q8N8R3 303 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms