RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 KIR2DL5BA0A0G2JPC4 375 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 A0A0J9YX75 114 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 A8MTW9 85 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 D6R8Y8 96 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 F6UB75 175 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 TCF21O43680 179 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 LEPROTL1O95214 131 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 CSN3P07498 182 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 RNASE1P07998 156 aaKnown RBP4.16□□□□□ -1.74
NEK3-211ENST00000629912 DDTP30046 118 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 RNASE4P34096 147 aaKnown RBP4.16□□□□□ -1.74
NEK3-211ENST00000629912 LEPP41159 167 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 DEFB1P60022 68 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 CTAG1AP78358 180 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 TDRG1Q3Y452 100 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 ANXA2RQ3ZCQ2 193 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 PET117Q6UWS5 81 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 Q6ZQT7 251 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 FA2HQ7L5A8 372 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 SMIM15Q7Z3B0 74 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 SPATA12Q7Z6I5 190 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 WFDC3Q8IUB2 231 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 KIR2DL5AQ8N109 375 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 OR11H1Q8NG94 326 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 OR9G4Q8NGQ1 327 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 DUX5Q96PT3 197 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 TMEM70Q9BUB7 260 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 ESM1Q9NQ30 184 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 AP5S1Q9NUS5 200 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 SIGLEC8Q9NYZ4 499 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 HELZ2Q9BYK8 2649 aaKnown RBP4.15□□□□□ -1.74
NEK3-211ENST00000629912 TRAV25A0A0B4J276 109 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 MUC21A0A0G2JKD1 596 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 MUC21A0A140T8X8 626 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 C20orf202A1L168 122 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 C7orf71A4D174 169 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 TSPOP30536 169 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 IFI27P40305 119 aaPredicted RBP4.15□□□□□ -1.75
NEK3-211ENST00000629912 ASIPP42127 132 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 SLURP1P55000 103 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 SSTP61278 116 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 PSMG4Q5JS54 123 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 PRR31Q5SQ13 230 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 MUC21Q5SSG8 566 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 SPANXN1Q5VSR9 72 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 FOXI2Q6ZQN5 318 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 C18orf65Q6ZTR6 163 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 POM121L12Q8N7R1 296 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 OR10AG1Q8NH19 301 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 MRAP2Q96G30 205 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 C14orf144Q96I85 54 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 NDUFAF3Q9BU61 184 aa4.15□□□□□ -1.75
NEK3-211ENST00000629912 ZNF469Q96JG9 3925 aaPredicted RBP4.15□□□□□ -1.75
NEK3-211ENST00000629912 SORL1Q92673 2214 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 ITPR2Q14571 2701 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 TRAV9-2A0A087WT02 112 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 LOC389332A0A1B0GUA5 103 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 H3BVH4 76 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 GNRH2O43555 120 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 NXPH4O95158 308 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 NDUFA7O95182 113 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 TNFRSF6BO95407 300 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 NPYP01303 97 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 ZNF688P0C7X2 276 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 RNASE3P12724 160 aaKnown RBP4.14□□□□□ -1.75
NEK3-211ENST00000629912 EVI2AP22794 236 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 S100A4P26447 101 aaKnown RBP4.14□□□□□ -1.75
NEK3-211ENST00000629912 TFPI2P48307 235 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 DEFA6Q01524 100 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 FHL3Q13643 280 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 KIR3DS1Q14943 382 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 DEFB114Q30KQ6 69 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 FAM159AQ6UWV7 190 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 AMTNQ6UX39 209 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 Q8N8P6 123 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 OR2K2Q8NGT1 345 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 ZNF418Q8TF45 676 aaPredicted RBP4.14□□□□□ -1.75
NEK3-211ENST00000629912 DLX4Q92988 240 aaPredicted RBP4.14□□□□□ -1.75
NEK3-211ENST00000629912 CLUHP3Q96NS8 147 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 MIEN1Q9BRT3 115 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 VAMP8Q9BV40 100 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 ZNF747Q9BV97 191 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 MAP1LC3CQ9BXW4 147 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 MAP1LC3AQ9H492 121 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 NXT2Q9NPJ8 142 aaKnown RBP4.14□□□□□ -1.75
NEK3-211ENST00000629912 MUC4Q99102 2169 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
NEK3-211ENST00000629912 FLNAP21333 2647 aaKnown RBP4.13□□□□□ -1.75
NEK3-211ENST00000629912 TLN2Q9Y4G6 2542 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 IGLV2-18A0A075B6J9 118 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 A0A096LNJ9 63 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 TRAV12-3A0A0B4J271 114 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 SMKR1H3BMG3 65 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 J3KRW8 73 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 M0R381 172 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 PPP1R17O96001 155 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 FCER1GP30273 86 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 CDKN1BP46527 198 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms