RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 KIR2DL5BA0A0G2JN68 375 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 KIR2DL5BA0A0G2JPC4 375 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 UBE2CO00762 179 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 P01737 135 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 RBPMS2Q6ZRY4 209 aaKnown RBP17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 KIR2DL5AQ8N109 375 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 OR8A1Q8NGG7 326 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 KIR2DL5BQ8NHK3 375 aa17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 PHLDA1Q8WV24 401 aaPredicted RBP17.58■□□□□ 0.4
CAPNS1-216ENST00000628306 RPL19P84098 196 aaKnown RBP17.57■□□□□ 0.4
CAPNS1-216ENST00000628306 SMUG1Q53HV7 270 aa17.57■□□□□ 0.4
CAPNS1-216ENST00000628306 TSKUQ8WUA8 353 aa17.57■□□□□ 0.4
CAPNS1-216ENST00000628306 GFRA4Q9GZZ7 299 aa17.57■□□□□ 0.4
CAPNS1-216ENST00000628306 RPP21Q9H633 154 aaKnown RBP17.57■□□□□ 0.4
CAPNS1-216ENST00000628306 DYNC1H1Q14204 4646 aaKnown RBP17.57■□□□□ 0.4
CAPNS1-216ENST00000628306 TGIF2-C20orf24A0A0A6YYL0 155 aa17.56■□□□□ 0.4
CAPNS1-216ENST00000628306 A8MWL6 223 aa17.56■□□□□ 0.4
CAPNS1-216ENST00000628306 CXCL1P09341 107 aa17.56■□□□□ 0.4
CAPNS1-216ENST00000628306 CRIP1P50238 77 aa17.56■□□□□ 0.4
CAPNS1-216ENST00000628306 ERCC8Q13216 396 aa17.56■□□□□ 0.4
CAPNS1-216ENST00000628306 PRR27Q6MZM9 219 aa17.56■□□□□ 0.4
CAPNS1-216ENST00000628306 FOXA3P55318 350 aaPredicted RBP17.55■□□□□ 0.4
CAPNS1-216ENST00000628306 FAM162BQ5T6X4 162 aa17.55■□□□□ 0.4
CAPNS1-216ENST00000628306 IGKV3-7A0A075B6H7 116 aa17.54■□□□□ 0.4
CAPNS1-216ENST00000628306 FAM19A4Q96LR4 140 aa17.54■□□□□ 0.4
CAPNS1-216ENST00000628306 MAP6D1Q9H9H5 199 aa17.54■□□□□ 0.4
CAPNS1-216ENST00000628306 FABP5P3A8MUU1 101 aa17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 RPL35AP18077 110 aaKnown RBP17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 FAM3BP58499 235 aaPredicted RBP17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 C8orf49Q96NF6 230 aa17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 ODF3Q96PU9 254 aa17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 SAV1Q9H4B6 383 aaPredicted RBP17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 COX19Q49B96 90 aa17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 APRG1Q8IVJ8 170 aa17.53■□□□□ 0.4
CAPNS1-216ENST00000628306 A0A1W2PPQ1 181 aa17.52■□□□□ 0.39
CAPNS1-216ENST00000628306 OR4C46A6NHA9 309 aa17.52■□□□□ 0.39
CAPNS1-216ENST00000628306 CRISP2P16562 243 aa17.52■□□□□ 0.39
CAPNS1-216ENST00000628306 Q8TAT8 98 aa17.52■□□□□ 0.39
CAPNS1-216ENST00000628306 NAT8BQ9UHF3 227 aa17.52■□□□□ 0.39
CAPNS1-216ENST00000628306 DUSP14O95147 198 aaKnown RBP17.51■□□□□ 0.39
CAPNS1-216ENST00000628306 CMC4P56277 68 aaPredicted RBP17.51■□□□□ 0.39
CAPNS1-216ENST00000628306 RPS20P60866 119 aaKnown RBP17.51■□□□□ 0.39
CAPNS1-216ENST00000628306 HIST1H1AQ02539 215 aaPredicted RBP17.51■□□□□ 0.39
CAPNS1-216ENST00000628306 A0A0J9YX75 114 aa17.5■□□□□ 0.39
CAPNS1-216ENST00000628306 XKRY2A2RUG3 117 aa17.5■□□□□ 0.39
CAPNS1-216ENST00000628306 ZNF124Q15973 351 aa17.5■□□□□ 0.39
CAPNS1-216ENST00000628306 PSMG4Q5JS54 123 aa17.5■□□□□ 0.39
CAPNS1-216ENST00000628306 RASL11AQ6T310 242 aa17.5■□□□□ 0.39
CAPNS1-216ENST00000628306 FOXI2Q6ZQN5 318 aa17.5■□□□□ 0.39
CAPNS1-216ENST00000628306 SH2D1AO60880 128 aa17.49■□□□□ 0.39
CAPNS1-216ENST00000628306 ZNF688P0C7X2 276 aa17.49■□□□□ 0.39
CAPNS1-216ENST00000628306 RPS10P46783 165 aaKnown RBP17.49■□□□□ 0.39
CAPNS1-216ENST00000628306 TFPI2P48307 235 aa17.49■□□□□ 0.39
CAPNS1-216ENST00000628306 EBLN2Q6P2I7 272 aa17.49■□□□□ 0.39
CAPNS1-216ENST00000628306 OR2D3Q8NGH3 330 aa17.49■□□□□ 0.39
CAPNS1-216ENST00000628306 DNAH11Q96DT5 4516 aa17.48■□□□□ 0.39
CAPNS1-216ENST00000628306 C1orf196B1AJZ1 125 aa17.48■□□□□ 0.39
CAPNS1-216ENST00000628306 NANOS2P60321 138 aaKnown RBP17.48■□□□□ 0.39
CAPNS1-216ENST00000628306 Q6AWC8 147 aa17.48■□□□□ 0.39
CAPNS1-216ENST00000628306 A8MTW9 85 aa17.47■□□□□ 0.39
CAPNS1-216ENST00000628306 ZNF80P51504 273 aaPredicted RBP17.47■□□□□ 0.39
CAPNS1-216ENST00000628306 ZFAND2AQ8N6M9 145 aa17.47■□□□□ 0.39
CAPNS1-216ENST00000628306 NEU1Q99519 415 aa17.47■□□□□ 0.39
CAPNS1-216ENST00000628306 TMEM189A5PLL7 270 aa17.46■□□□□ 0.39
CAPNS1-216ENST00000628306 LINC01559Q495D7 138 aa17.46■□□□□ 0.39
CAPNS1-216ENST00000628306 ATP5L2Q7Z4Y8 100 aa17.46■□□□□ 0.39
CAPNS1-216ENST00000628306 CA1P00915 261 aaPredicted RBP17.45■□□□□ 0.38
CAPNS1-216ENST00000628306 PRB4P10163 310 aaPredicted RBP17.45■□□□□ 0.38
CAPNS1-216ENST00000628306 NUP35Q8NFH5 326 aa17.45■□□□□ 0.38
CAPNS1-216ENST00000628306 CLUHP3Q96NS8 147 aa17.45■□□□□ 0.38
CAPNS1-216ENST00000628306 C11orf68Q9H3H3 251 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-216ENST00000628306 HIGD1CA8MV81 97 aa17.44■□□□□ 0.38
CAPNS1-216ENST00000628306 F6UB75 175 aa17.44■□□□□ 0.38
CAPNS1-216ENST00000628306 ZNF705DP0CH99 300 aaPredicted RBP17.44■□□□□ 0.38
CAPNS1-216ENST00000628306 ZNF705BP0CI00 300 aaPredicted RBP17.44■□□□□ 0.38
CAPNS1-216ENST00000628306 RAB5BP61020 215 aa17.44■□□□□ 0.38
CAPNS1-216ENST00000628306 CSTL1Q9H114 145 aa17.44■□□□□ 0.38
CAPNS1-216ENST00000628306 KLLNB2CW77 178 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 LEPP41159 167 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 WDR73Q6P4I2 378 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 GTSF1Q8WW33 167 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 GNB1LQ9BYB4 327 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 TMA7Q9Y2S6 64 aaKnown RBP17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 PKD1P98161 4303 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 ABCA13Q86UQ4 5058 aa17.43■□□□□ 0.38
CAPNS1-216ENST00000628306 TRAV21A0A0B4J279 112 aa17.42■□□□□ 0.38
CAPNS1-216ENST00000628306 TSPOP30536 169 aa17.42■□□□□ 0.38
CAPNS1-216ENST00000628306 PHOX2AO14813 284 aa17.41■□□□□ 0.38
CAPNS1-216ENST00000628306 MT-ND6P03923 174 aa17.41■□□□□ 0.38
CAPNS1-216ENST00000628306 C11orf45Q8TAV5 145 aa17.41■□□□□ 0.38
CAPNS1-216ENST00000628306 A0A1B0GW15 77 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 HLA-DRB4P13762 266 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 TCL1AP56279 114 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 DEFB131AP59861 70 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 ZNF575Q86XF7 245 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 APLNQ9ULZ1 77 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 HLA-DRB4X5D2U9 266 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 TRGC2P03986 189 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 GPX1P07203 203 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 DEFB1P60022 68 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms