RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 LINC00305Q7Z4B0 112 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 KCNS1Q96KK3 526 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 TRGV9Q99603 122 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 VAMP8Q9BV40 100 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 TNFRSF19Q9NS68 423 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 NCBP2LA6PVI3 153 aaKnown RBP8.95□□□□□ -0.98
LINC00538-201ENST00000626109 E7EUB6 86 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 SPINK4O60575 86 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 PMAIP1Q13794 54 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 TMEM190Q8WZ59 177 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 BORCS7Q96B45 105 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 MIEN1Q9BRT3 115 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 IGHV1-3A0A0C4DH29 117 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 C9JAW5 83 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 MRPS12O15235 138 aaKnown RBP8.94□□□□□ -0.98
LINC00538-201ENST00000626109 RPL27AP46776 148 aaKnown RBP8.94□□□□□ -0.98
LINC00538-201ENST00000626109 LINC00310P59036 64 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 DEFB112Q30KQ8 113 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 MRPL54Q6P161 138 aaKnown RBP8.94□□□□□ -0.98
LINC00538-201ENST00000626109 PATE2Q6UY27 113 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 ZNF705AQ6ZN79 300 aaPredicted RBP8.94□□□□□ -0.98
LINC00538-201ENST00000626109 DYNAPQ8N1N2 210 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 OR4B1Q8NGF8 309 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 VN1R17PQ8TDU5 208 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 FXYD5Q96DB9 178 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 EPDR1Q9UM22 224 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 HIGD1AQ9Y241 93 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 SOX21Q9Y651 276 aaPredicted RBP8.94□□□□□ -0.98
LINC00538-201ENST00000626109 ZANQ9Y493 2812 aa8.94□□□□□ -0.98
LINC00538-201ENST00000626109 IGKV1D-37A0A075B6S9 117 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 HYPMO75409 117 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 PYYP10082 97 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 RPL18AQ02543 176 aaKnown RBP8.93□□□□□ -0.98
LINC00538-201ENST00000626109 PAPPA-AS1Q5QFB9 102 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 MORN5Q5VZ52 161 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 PVRIGQ6DKI7 326 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 ATP5L2Q7Z4Y8 100 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 FAM103A1Q9BTL3 118 aaKnown RBP8.93□□□□□ -0.98
LINC00538-201ENST00000626109 TIMM23O14925 209 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 SLC25A5P05141 298 aaKnown RBP8.93□□□□□ -0.98
LINC00538-201ENST00000626109 EVI2AP22794 236 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 KIAA1644Q3SXP7 199 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 C10orf55Q5SWW7 151 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
LINC00538-201ENST00000626109 ZNF469Q96JG9 3925 aaPredicted RBP8.92□□□□□ -0.98
LINC00538-201ENST00000626109 HIVEP1P15822 2718 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 A0A1W2PS18 150 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 PGPA6NDG6 321 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 DIRC3C9JPN6 131 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 BMPR1BO00238 502 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 ZNF324O75467 553 aaPredicted RBP8.92□□□□□ -0.98
LINC00538-201ENST00000626109 TFPI2P48307 235 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 KRTDAPP60985 99 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 FMC1Q96HJ9 113 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 RNF5Q99942 180 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 IGHV3-72A0A0B4J1Y9 119 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 IGLC7A0M8Q6 106 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 FRMD6-AS1P0C7T7 363 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 MYCNOSP40205 109 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 MFAP2P55001 183 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 RHOGP84095 191 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
LINC00538-201ENST00000626109 LINC00479Q96M42 142 aa8.92□□□□□ -0.98
LINC00538-201ENST00000626109 NAA38Q9BRA0 125 aaKnown RBP8.92□□□□□ -0.98
LINC00538-201ENST00000626109 HIVEP2P31629 2446 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 F8P00451 2351 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 F6UB75 175 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 C5orf17Q8NAS9 161 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 BLNKQ8WV28 456 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 PAM16Q9Y3D7 125 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 CELSR1Q9NYQ6 3014 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 TLN2Q9Y4G6 2542 aa8.91□□□□□ -0.98
LINC00538-201ENST00000626109 A8MWL6 223 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 F2Z2F3 143 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 H3BUX3 64 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 IGHV3-48P01763 117 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 FAM106CPP0CH98 169 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 SMIM17P0DL12 118 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 HES1Q14469 280 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 Q6YL49 198 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 EXOC3-AS1Q8N2X6 119 aa8.9□□□□□ -0.98
LINC00538-201ENST00000626109 F11RQ9Y624 299 aaKnown RBP8.9□□□□□ -0.98
LINC00538-201ENST00000626109 CD24P25063 80 aa8.9□□□□□ -0.99
LINC00538-201ENST00000626109 PMCHL1Q16048 86 aa8.9□□□□□ -0.99
LINC00538-201ENST00000626109 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.99
LINC00538-201ENST00000626109 PPP1R27Q86WC6 154 aa8.9□□□□□ -0.99
LINC00538-201ENST00000626109 HIGD1CA8MV81 97 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 P01737 135 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 IGHV4-59P01825 116 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 MRGPRG-AS1Q2M3A8 158 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 PRR31Q5SQ13 230 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 C18orf32Q8TCD1 76 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 RITA1Q96K30 269 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 GFRA4Q9GZZ7 299 aa8.89□□□□□ -0.99
LINC00538-201ENST00000626109 RPP21Q9H633 154 aaKnown RBP8.89□□□□□ -0.99
LINC00538-201ENST00000626109 MRPL36Q9P0J6 103 aaKnown RBP8.89□□□□□ -0.99
LINC00538-201ENST00000626109 ZNF492Q9P255 531 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms