RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 GAGE2BQ13066 116 aa8.68□□□□□ -1.02
VPS8-227ENST00000625842 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
VPS8-227ENST00000625842 C9JQL5 133 aa8.68□□□□□ -1.02
VPS8-227ENST00000625842 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
VPS8-227ENST00000625842 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS8-227ENST00000625842 C2orf66Q6UXQ4 117 aa8.67□□□□□ -1.02
VPS8-227ENST00000625842 UBE2D1P51668 147 aa8.67□□□□□ -1.02
VPS8-227ENST00000625842 PDCD11Q14690 1871 aaKnown RBP8.67□□□□□ -1.02
VPS8-227ENST00000625842 TMEM263Q8WUH6 116 aaKnown RBP8.67□□□□□ -1.02
VPS8-227ENST00000625842 H0YIZ8 118 aa8.67□□□□□ -1.02
VPS8-227ENST00000625842 BCL6BQ8N143 479 aaPredicted RBP8.67□□□□□ -1.02
VPS8-227ENST00000625842 MED12Q93074 2177 aa8.67□□□□□ -1.02
VPS8-227ENST00000625842 SOCS3O14543 225 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 MPV17L2Q567V2 206 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 ZNF491Q8N8L2 437 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 Q8N9W7 124 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 IL15RAQ13261 267 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 TDRG1Q3Y452 100 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 DSCR8Q96T75 97 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 TP53BP1Q12888 1972 aaPredicted RBP8.66□□□□□ -1.02
VPS8-227ENST00000625842 IGLL1P15814 213 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 LMO4P61968 165 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 FER1L5A0AVI2 2057 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 NDUFS5O43920 106 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 NDUFA7O95182 113 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 IGHG4P01861 327 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 SIPA1L1O43166 1804 aa8.66□□□□□ -1.02
VPS8-227ENST00000625842 IGHV3-38A0A0C4DH36 116 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 C16orf54Q6UWD8 224 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 NAV3Q8IVL0 2385 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.65□□□□□ -1.02
VPS8-227ENST00000625842 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 Q8N8P6 123 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 SLC25A29Q8N8R3 303 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 TRAV8-2A0A0B4J237 113 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 FREM3P0C091 2139 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 FHL1Q13642 323 aa8.65□□□□□ -1.02
VPS8-227ENST00000625842 LINC00322Q6ZN03 302 aaPredicted RBP8.65□□□□□ -1.02
VPS8-227ENST00000625842 C19orf84I3L1E1 186 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 WDR86Q86TI4 376 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 ESDP10768 282 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 ZFP2Q6ZN57 461 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 TANC1Q9C0D5 1861 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 HSD52Q0P140 79 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 CLPSL2Q6UWE3 100 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 NCOR2Q9Y618 2525 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 LGALS9O00182 355 aa8.64□□□□□ -1.03
VPS8-227ENST00000625842 KIR2DL5BA0A0G2JN68 375 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 KIR2DL5BA0A0G2JPC4 375 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 KIR2DL5AQ8N109 375 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 SIP14410 1827 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 TRBV10-1A0A0K0K1A3 114 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 GREB1Q4ZG55 1949 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 CCL25O15444 150 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 HLA-DMBP28068 263 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
VPS8-227ENST00000625842 CITED1Q99966 193 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 DEFB125Q8N687 156 aa8.63□□□□□ -1.03
VPS8-227ENST00000625842 IGLV11-55A0A075B6I3 123 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 GTSF1Q8WW33 167 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 Q6ZSV7 163 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 SPCS1Q9Y6A9 102 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 NPC2P61916 151 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 TMEM170AQ8WVE7 144 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 CRYGDP07320 174 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 AMN1Q8IY45 258 aa8.62□□□□□ -1.03
VPS8-227ENST00000625842 QRFPP83859 136 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 MLANAQ16655 118 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 FAM104BQ5XKR9 115 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 ANK1P16157 1881 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 LRRK1Q38SD2 2015 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 RNF126Q9BV68 326 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
VPS8-227ENST00000625842 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 IGLC7A0M8Q6 106 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 SEM1Q6ZVN7 128 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 FAM19A2Q8N3H0 131 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 NUP35Q8NFH5 326 aa8.61□□□□□ -1.03
VPS8-227ENST00000625842 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 BVES-AS1Q5T3Y7 98 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 CARHSP1Q9Y2V2 147 aaKnown RBP8.6□□□□□ -1.03
VPS8-227ENST00000625842 TNCP24821 2201 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 ZNF503-AS2A6NEH8 195 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 TPSG1Q9NRR2 321 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 SCN8AQ9UQD0 1980 aa8.6□□□□□ -1.03
VPS8-227ENST00000625842 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
VPS8-227ENST00000625842 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
VPS8-227ENST00000625842 RNF222A6NCQ9 220 aa8.59□□□□□ -1.03
VPS8-227ENST00000625842 SAMD5Q5TGI4 173 aa8.59□□□□□ -1.03
VPS8-227ENST00000625842 C2orf82Q6UX34 121 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms