RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PMCHP20382 165 aa16.21■□□□□ 0.18
SGMS1-210ENST00000619438 FAM209BQ5JX69 171 aa16.21■□□□□ 0.18
SGMS1-210ENST00000619438 Q8TAT8 98 aa16.21■□□□□ 0.18
SGMS1-210ENST00000619438 KIR2DL5BA0A0G2JN68 375 aa16.2■□□□□ 0.18
SGMS1-210ENST00000619438 KIR2DL5BA0A0G2JPC4 375 aa16.2■□□□□ 0.18
SGMS1-210ENST00000619438 PRAC2D3DTV9 90 aa16.2■□□□□ 0.18
SGMS1-210ENST00000619438 HSBP1O75506 76 aa16.2■□□□□ 0.18
SGMS1-210ENST00000619438 PRB4P10163 310 aaPredicted RBP16.2■□□□□ 0.18
SGMS1-210ENST00000619438 KIR2DL5AQ8N109 375 aa16.2■□□□□ 0.18
SGMS1-210ENST00000619438 CHCHD1Q96BP2 118 aaKnown RBP16.2■□□□□ 0.18
SGMS1-210ENST00000619438 PEF1Q9UBV8 284 aaKnown RBP16.2■□□□□ 0.18
SGMS1-210ENST00000619438 FABP5P3A8MUU1 101 aa16.19■□□□□ 0.18
SGMS1-210ENST00000619438 ZNF207O43670 478 aaKnown RBP16.19■□□□□ 0.18
SGMS1-210ENST00000619438 ZNF705DP0CH99 300 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-210ENST00000619438 ZNF705BP0CI00 300 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-210ENST00000619438 CTRLP40313 264 aa16.19■□□□□ 0.18
SGMS1-210ENST00000619438 ZNF80P51504 273 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-210ENST00000619438 MRAPQ8TCY5 172 aa16.19■□□□□ 0.18
SGMS1-210ENST00000619438 TRBV12-3P01733 135 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 KRTAP10-11P60412 298 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 C9orf47Q6ZRZ4 202 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 RNF182Q8N6D2 247 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 Q8N976 141 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 URB1-AS1Q96HZ7 61 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 DNAH3Q8TD57 4116 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 IGHV3OR16-13A0A075B7E8 117 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 IGHV3-74A0A0B4J1X5 117 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 IGLC6P0CF74 106 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 EGFEM1PQ0D2K5 195 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 LYZL1Q6UWQ5 148 aa16.18■□□□□ 0.18
SGMS1-210ENST00000619438 RAB4AP20338 218 aa16.17■□□□□ 0.18
SGMS1-210ENST00000619438 UNQ9165/PRO28630Q6UXU0 137 aa16.17■□□□□ 0.18
SGMS1-210ENST00000619438 FAM19A2Q8N3H0 131 aa16.17■□□□□ 0.18
SGMS1-210ENST00000619438 IGHV3-49A0A0A0MS15 119 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 SAP30O75446 220 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 INSL3P51460 131 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 ZNF138P52744 262 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 KRTDAPP60985 99 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 ERCC8Q13216 396 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 LINC01559Q495D7 138 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 RNASEKQ6P5S7 137 aaKnown RBP16.16■□□□□ 0.18
SGMS1-210ENST00000619438 ZNF575Q86XF7 245 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 C14orf144Q96I85 54 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 AGPAT4-IT1Q9H0P7 198 aa16.16■□□□□ 0.18
SGMS1-210ENST00000619438 DEFB121Q5J5C9 76 aa16.15■□□□□ 0.18
SGMS1-210ENST00000619438 NDUFAF3Q9BU61 184 aa16.15■□□□□ 0.18
SGMS1-210ENST00000619438 LENEPQ9Y5L5 61 aa16.15■□□□□ 0.18
SGMS1-210ENST00000619438 C3orf79P0CE67 100 aa16.14■□□□□ 0.18
SGMS1-210ENST00000619438 NTF3P20783 257 aa16.14■□□□□ 0.18
SGMS1-210ENST00000619438 HIST1H1AQ02539 215 aaPredicted RBP16.14■□□□□ 0.18
SGMS1-210ENST00000619438 TMEM78Q5T7P6 136 aa16.14■□□□□ 0.18
SGMS1-210ENST00000619438 C20orf144Q9BQM9 153 aa16.14■□□□□ 0.18
SGMS1-210ENST00000619438 CNFNQ9BYD5 112 aa16.14■□□□□ 0.18
SGMS1-210ENST00000619438 M0R2Z0 102 aa16.14■□□□□ 0.17
SGMS1-210ENST00000619438 FER1L6-AS1Q8NA97 138 aa16.14■□□□□ 0.17
SGMS1-210ENST00000619438 C16orf92Q96LL3 132 aa16.14■□□□□ 0.17
SGMS1-210ENST00000619438 SOCS3O14543 225 aa16.13■□□□□ 0.17
SGMS1-210ENST00000619438 LINC00614P0C842 121 aa16.13■□□□□ 0.17
SGMS1-210ENST00000619438 TPPP3Q9BW30 176 aa16.13■□□□□ 0.17
SGMS1-210ENST00000619438 TMSB15BA0A087X1C1 80 aa16.12■□□□□ 0.17
SGMS1-210ENST00000619438 K7EMT4 169 aa16.12■□□□□ 0.17
SGMS1-210ENST00000619438 SYNJ2BPP57105 145 aa16.12■□□□□ 0.17
SGMS1-210ENST00000619438 GPHB5Q86YW7 130 aa16.12■□□□□ 0.17
SGMS1-210ENST00000619438 U3KQK5 164 aa16.12■□□□□ 0.17
SGMS1-210ENST00000619438 FAM104BQ5XKR9 115 aa16.11■□□□□ 0.17
SGMS1-210ENST00000619438 IGHV7-4-1A0A0J9YVY3 117 aa16.11■□□□□ 0.17
SGMS1-210ENST00000619438 ORM1P02763 201 aa16.11■□□□□ 0.17
SGMS1-210ENST00000619438 OR5AL1P0C617 328 aa16.11■□□□□ 0.17
SGMS1-210ENST00000619438 VAMP8Q9BV40 100 aa16.11■□□□□ 0.17
SGMS1-210ENST00000619438 DAZ1Q9NQZ3 744 aaKnown RBP16.11■□□□□ 0.17
SGMS1-210ENST00000619438 K7EIL1 84 aa16.1■□□□□ 0.17
SGMS1-210ENST00000619438 TMEM213A2RRL7 107 aa16.09■□□□□ 0.17
SGMS1-210ENST00000619438 C2orf70A6NJV1 201 aa16.09■□□□□ 0.17
SGMS1-210ENST00000619438 OR9G4Q8NGQ1 327 aa16.09■□□□□ 0.17
SGMS1-210ENST00000619438 LINC00477Q96M19 166 aa16.09■□□□□ 0.17
SGMS1-210ENST00000619438 IGHV1-24A0A0C4DH33 117 aa16.08■□□□□ 0.17
SGMS1-210ENST00000619438 BTF3P20290 206 aaKnown RBP16.08■□□□□ 0.17
SGMS1-210ENST00000619438 EBLN2Q6P2I7 272 aa16.08■□□□□ 0.17
SGMS1-210ENST00000619438 PMCHL1Q16048 86 aa16.08■□□□□ 0.16
SGMS1-210ENST00000619438 TDRG1Q3Y452 100 aa16.08■□□□□ 0.16
SGMS1-210ENST00000619438 FAM106AQ4KMX7 169 aa16.08■□□□□ 0.16
SGMS1-210ENST00000619438 C20orf173Q96LM9 149 aa16.08■□□□□ 0.16
SGMS1-210ENST00000619438 TMEM191AQ9H0A3 160 aa16.08■□□□□ 0.16
SGMS1-210ENST00000619438 SMPXQ9UHP9 88 aa16.08■□□□□ 0.16
SGMS1-210ENST00000619438 ZNF256Q9Y2P7 627 aaPredicted RBP16.08■□□□□ 0.16
SGMS1-210ENST00000619438 LBHQ53QV2 105 aaPredicted RBP16.07■□□□□ 0.16
SGMS1-210ENST00000619438 SAMD13Q5VXD3 122 aa16.07■□□□□ 0.16
SGMS1-210ENST00000619438 ZNF738Q8NE65 137 aa16.07■□□□□ 0.16
SGMS1-210ENST00000619438 RHPN1-AS1Q9BWJ2 59 aa16.07■□□□□ 0.16
SGMS1-210ENST00000619438 PEMTQ9UBM1 199 aa16.07■□□□□ 0.16
SGMS1-210ENST00000619438 IGKV3D-20A0A0C4DH25 116 aa16.06■□□□□ 0.16
SGMS1-210ENST00000619438 CRXO43186 299 aaPredicted RBP16.06■□□□□ 0.16
SGMS1-210ENST00000619438 TRBV7-9A0A0J9YWB2 115 aa16.05■□□□□ 0.16
SGMS1-210ENST00000619438 TWIST1Q15672 202 aa16.05■□□□□ 0.16
SGMS1-210ENST00000619438 ORMDL3Q8N138 153 aa16.05■□□□□ 0.16
SGMS1-210ENST00000619438 OR10J6PQ8NGY7 276 aa16.05■□□□□ 0.16
SGMS1-210ENST00000619438 C11orf21Q9P2W6 132 aa16.05■□□□□ 0.16
SGMS1-210ENST00000619438 UFC1Q9Y3C8 167 aa16.05■□□□□ 0.16
SGMS1-210ENST00000619438 MRPL51Q4U2R6 128 aaKnown RBP16.04■□□□□ 0.16
SGMS1-210ENST00000619438 TM4SF20Q53R12 229 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms