RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 TMEM14CQ9P0S9 112 aa11.46□□□□□ -0.58
PTPN9-206ENST00000618819 CADP27708 2225 aa11.46□□□□□ -0.58
PTPN9-206ENST00000618819 KMT2EQ8IZD2 1858 aa11.46□□□□□ -0.58
PTPN9-206ENST00000618819 C11orf52Q96A22 123 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 H0YGX0 51 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 CSRP2Q16527 193 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 IGKV2D-26A0A0A0MRZ7 120 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 RHOHQ15669 191 aa11.45□□□□□ -0.58
PTPN9-206ENST00000618819 SEM1Q6ZVN7 128 aa11.44□□□□□ -0.58
PTPN9-206ENST00000618819 LINC01356Q8N9X3 169 aa11.44□□□□□ -0.58
PTPN9-206ENST00000618819 HEATR5AQ86XA9 2040 aa11.44□□□□□ -0.58
PTPN9-206ENST00000618819 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
PTPN9-206ENST00000618819 APOC4P55056 127 aa11.44□□□□□ -0.58
PTPN9-206ENST00000618819 NDUFV3P56181 108 aaKnown RBP11.44□□□□□ -0.58
PTPN9-206ENST00000618819 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
PTPN9-206ENST00000618819 UBE2E1P51965 193 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 NPBQ8NG41 125 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 WT1-ASQ06250 92 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 Q6ZUT4 128 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 POLR2AP24928 1970 aaKnown RBP11.43□□□□□ -0.58
PTPN9-206ENST00000618819 NDUFA4O00483 81 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 C20orf197Q8N268 126 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 RNF152Q8N8N0 203 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
PTPN9-206ENST00000618819 PATJQ8NI35 1801 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 ZNF833PQ6ZTB9 187 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 POLEQ07864 2286 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 MED12Q93074 2177 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 GNLYP22749 145 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 IGHV3-30-3P0DP02 117 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
PTPN9-206ENST00000618819 FAM236DA0A1B0GTK5 79 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 WI2-2373I1.2A0A1W2PRP0 233 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 FAM236CP0DP71 79 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 SDIM1Q6ZPB5 146 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 ADAMTSL3P82987 1691 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 CEP290O15078 2479 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 MT-ATP8P03928 68 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 TMEM105Q8N8V8 129 aa11.41□□□□□ -0.58
PTPN9-206ENST00000618819 DIAPH2-AS1Q14236 149 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 SPTBN1Q01082 2364 aaKnown RBP11.4□□□□□ -0.58
PTPN9-206ENST00000618819 PHF3Q92576 2039 aaKnown RBP11.4□□□□□ -0.58
PTPN9-206ENST00000618819 Q0VFX4 171 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 K7EM74 188 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 STRCQ7RTU9 1775 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 SDK2Q58EX2 2172 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 PTPRDP23468 1912 aa11.4□□□□□ -0.58
PTPN9-206ENST00000618819 UBE2AP49459 152 aa11.4□□□□□ -0.59
PTPN9-206ENST00000618819 RPL39P62891 51 aaKnown RBP11.4□□□□□ -0.59
PTPN9-206ENST00000618819 C3orf22Q8N5N4 141 aa11.4□□□□□ -0.59
PTPN9-206ENST00000618819 E7EQL1 145 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 LOXL1Q08397 574 aaPredicted RBP11.39□□□□□ -0.59
PTPN9-206ENST00000618819 LINC01545Q5VT33 79 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 IGHV4-59P01825 116 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 C17orf58Q2M2W7 97 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 DOCK6Q96HP0 2047 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 TEX22C9J3V5 150 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 C10orf105Q8TEF2 133 aa11.39□□□□□ -0.59
PTPN9-206ENST00000618819 JMJD7-PLA2G4BH0Y9G9 81 aa11.38□□□□□ -0.59
PTPN9-206ENST00000618819 ZNF883P0CG24 379 aa11.38□□□□□ -0.59
PTPN9-206ENST00000618819 CASC2Q6XLA1 102 aa11.38□□□□□ -0.59
PTPN9-206ENST00000618819 COX7A2LO14548 114 aa11.38□□□□□ -0.59
PTPN9-206ENST00000618819 NYNRINQ9P2P1 1898 aaKnown RBP11.38□□□□□ -0.59
PTPN9-206ENST00000618819 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
PTPN9-206ENST00000618819 MSRB1Q9NZV6 116 aa11.38□□□□□ -0.59
PTPN9-206ENST00000618819 TNRC6AQ8NDV7 1962 aaKnown RBP11.38□□□□□ -0.59
PTPN9-206ENST00000618819 ESM1Q9NQ30 184 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 LOC285556D6RIA3 1793 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 ZFP36L1Q07352 338 aaKnown RBP11.37□□□□□ -0.59
PTPN9-206ENST00000618819 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 SIPA1L3O60292 1781 aaPredicted RBP11.37□□□□□ -0.59
PTPN9-206ENST00000618819 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
PTPN9-206ENST00000618819 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 IGHV1-69P01742 117 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 VWCEQ96DN2 955 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 E9PQ18 207 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 MSMBP08118 114 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
PTPN9-206ENST00000618819 LTBP4Q8N2S1 1624 aa11.36□□□□□ -0.59
PTPN9-206ENST00000618819 GYPEP15421 78 aa11.36□□□□□ -0.59
PTPN9-206ENST00000618819 IGLV3-9A0A075B6K5 115 aa11.35□□□□□ -0.59
PTPN9-206ENST00000618819 TCL1BO95988 128 aa11.35□□□□□ -0.59
PTPN9-206ENST00000618819 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
PTPN9-206ENST00000618819 MRPL36Q9P0J6 103 aaKnown RBP11.35□□□□□ -0.59
PTPN9-206ENST00000618819 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-206ENST00000618819 A0A0J9YWU9 116 aa11.35□□□□□ -0.59
PTPN9-206ENST00000618819 MYLKQ15746 1914 aa11.35□□□□□ -0.59
PTPN9-206ENST00000618819 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
PTPN9-206ENST00000618819 K7EQD1 137 aa11.34□□□□□ -0.59
PTPN9-206ENST00000618819 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms